Corallococcus macrosporus DSM 14697: MYMAC_004580
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Entry
MYMAC_004580 CDS
T05096
Name
(GenBank) single-stranded DNA exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmas
Corallococcus macrosporus DSM 14697
Pathway
mmas03410
Base excision repair
mmas03430
Mismatch repair
mmas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYMAC_004580
03430 Mismatch repair
MYMAC_004580
03440 Homologous recombination
MYMAC_004580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmas03400
]
MYMAC_004580
DNA repair and recombination proteins [BR:
mmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MYMAC_004580
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MYMAC_004580
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MYMAC_004580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ATB48947
UniProt:
A0A250JZM5
LinkDB
All DBs
Position
complement(5776786..5778498)
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AA seq
570 aa
AA seq
DB search
MRWLLPDVVEQEVASLAGELSLHPLAAKVLLHRGYRTPESASAFLSDRLADLPDPFRMKG
MPAGVDRLIRAIRSREKVTLYGDYDVDGVCSTSLLYLFMKELGAPPATYIPHRLDEGYGL
NVNAVERIAAEGTRVLVTLDCGITSVAEITRARELGLDVLVVDHHTVPPTLPPAVAVLNP
HQPGCEYPTKALCAAGVAFNFCMGLRKRLRDEGFFASRKEPNLRALMDLVALATVADVVP
LTGANRILVSHGLQELSAARRPGVRALKEVAGLDPDASVTAGQVGFRLGPRINAAGRLHD
ASLGLQLLCSESPETARSLAAVLDRANAERQGIESSILTQALAQAESLKDARGLVLYDEG
WHPGVIGIVASRVVERFYRPTVMVGVKDGVGKGSARSIEAFHLHDALSGCAELLTRFGGH
KHAAGLTIDADRLPAFREAFEKIAHQRLTPEDLIPRCRVDAVVNPHELDAHAVESLQRLG
PFGQGNPEPVLVLRRQVARPRVLQPKSGTGSGHLKLALMDAPELDAIGFNMADRATLVDG
PVDLAFQAGFDTFRGQRKLSLRLKDLRVAA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtggttgcttccagatgtggtcgagcaggaggtggcgtccctcgcgggagagctg
tcactgcacccgctcgcggcgaaggtgctgctgcaccgtggctaccgcaccccggagtcc
gcgtcggcgttcctgtccgaccggctcgcggacctgccggacccgttccggatgaagggg
atgccggcgggggtggaccgcctcatccgcgcgattcgctcgcgggagaaggtgacgctc
tacggcgactacgacgtggacggcgtctgctccacgtcgctgctctacctcttcatgaag
gagctgggcgcgccgcccgccacgtacatcccccaccggctggatgagggctacggcctc
aacgtcaacgcggtggagcgcatcgccgcggagggcacgcgggtgttggtgacgctggac
tgcggcatcacctcggtggcggagattacccgcgccagggagctgggcctggacgtgctg
gtggtggaccaccacacggtgccgcccacgctgccgcccgcggtggcggtgctcaacccg
caccagcccggctgcgagtacccgacgaaggcgctgtgcgccgcgggtgtggccttcaac
ttctgcatgggcctccgcaagcgcctgcgcgacgagggcttcttcgccagccgcaaggag
cccaacctgcgcgccctgatggacctggtggcgctggccacggtggcggacgtggtgccg
ctcaccggcgccaaccgcatcctggtgtcccacggcctccaggagctgagcgcggcccgc
cgtccgggcgtgcgcgccttgaaggaggtggcgggcctggatccggacgcctccgtcacc
gcgggccaggtgggcttccgcctggggccccgcatcaacgcggcgggccggctccatgac
gcctcgctggggctccagttgctgtgctcggagtcgccagagacggcgcgctcgctggcc
gcggtgttggaccgcgccaacgcggagcgccagggcatcgagagcagcatcctcacgcag
gcgctggcccaggcggagtcgctgaaggacgcgcgcggcctggtgctgtacgacgagggc
tggcacccgggcgtcatcggcatcgtcgcctcgcgcgtggtggagcgcttctaccggccc
accgtcatggtgggggtgaaggacggcgtggggaagggctcggcgcgcagcatcgaggcc
ttccacctgcacgacgcgctcagtggctgcgcggagctgctgacgcgcttcggcggccac
aagcacgccgcggggctcaccatcgacgcggaccggctgcccgccttccgggaggccttc
gagaagattgcccaccagcgcctgacgccggaggacctgattccgcgctgccgcgtggac
gcggtggtgaacccccacgaactggacgcgcacgccgtggagtcgctccagcggctgggg
cccttcggccagggcaacccggagcccgtgctggtgctgcgccggcaggtggcccgcccg
cgcgtgctgcagcccaagtccggcaccggcagcggacacctcaagctggccctgatggac
gcgccggagctggacgccattggcttcaacatggcggaccgggccacgctggtggatggc
ccggtggacctggccttccaggccggcttcgacaccttccgaggccagcgcaagctgtcc
ctgcggctcaaggacctgcgcgtggccgcctag
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