Mycolicibacterium mageritense: MMAGJ_11440
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Entry
MMAGJ_11440 CDS
T07395
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mmat
Mycolicibacterium mageritense
Pathway
mmat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MMAGJ_11440
09124 Replication and repair
03420 Nucleotide excision repair
MMAGJ_11440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmat03021
]
MMAGJ_11440
03400 DNA repair and recombination proteins [BR:
mmat03400
]
MMAGJ_11440
Enzymes [BR:
mmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMAGJ_11440
Transcription machinery [BR:
mmat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MMAGJ_11440
DNA repair and recombination proteins [BR:
mmat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MMAGJ_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
BBX31862
LinkDB
All DBs
Position
1166732..1168381
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEIDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVSFSRYPVPQPLLVDIVDTMARYGRLQLIKHPAHGLTLVSFDRAVLEEVL
RNKKIAPMLGARIDDDTVIVHGSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIELDQNGW
ALRDYQEMAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LVARTSLTENEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTMTDNERMIYATAEPDERYKLCSTVHTKIAVVRSILERHPGEQTLVIGAYLD
QLEELGQELDAPVIQGSTKNAEREALFDAFRRGEISTLVVSKVANFSIDLPEASVAVQVS
GTFGSRQEEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYIIKD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactgacggccctctgatcgtccagtccgacaagacggtcctgctcgaaatcgaccac
gagcaggccggggcggcgcgcgccgccatcgcgccgttcgccgagttggagcgcgcgccc
gaacacgttcacacctaccgcatcacacccctggcgttgtggaacgcgcgcgccgccggt
cacgacgccgagcaggtggtcgacgcgctggtgagcttctcgcgctatcccgtgccgcag
ccgctgctggtcgacatcgtcgacaccatggcgcgctacgggcggctacagctgatcaag
caccccgcccacggtttgaccctggtcagcttcgaccgtgcggtgctcgaggaggtgctg
cgcaacaagaagatcgccccgatgctgggggcgcggatagacgacgacaccgtgatcgtg
cacggcagcgagcgtgggcgggtcaagcagatgctgctcaagatcggctggcctgccgag
gatctggccggctatgtcgacggcgaggcgcatccgatcgaactggaccagaacggctgg
gcgctgcgcgactaccaggagatggccgcggactcgttctgggccggcggctcgggtgtg
gtggtgctgccgtgtggcgcgggcaagacgctggtgggggcggccgcgatggccaaggcc
ggggcgacgacgctgatcctggtcaccaacaccgtcgcgggccggcagtggaagcgcgag
ctggtggcgcgcacctcgctgaccgagaacgagatcggcgagtactcgggcgagaagaag
gagatccgtcccgtcaccattgcgacgtatcaggtgatcacgcgccgcaccaagggcgag
tacaagcacctggagctgttcgacagccgcgactggggcttgatcatctacgacgaggtg
cacctgctgcccgcgccggtgttccggatgaccgccgacctgcagtcgcggcgcaggctc
ggcctgaccgcgacgttgatccgcgaggacggccgtgagggcgatgtgttctcgttgatc
gggcccaagcgctacgacgctccgtggaaggacatcgaggcccagggctggatcgcgccc
gccgagtgcgtcgaggtccgggtgaccatgaccgacaacgagcgcatgatctatgccacg
gccgagcccgacgaacgctacaagctgtgctcgacggtgcacaccaagatcgctgtggtg
cgctcgatcctggagcgccaccccggcgaacagaccctggtcatcggcgcctacctggac
cagttggaggagctcgggcaggaactcgacgccccggtgatccaggggtcgaccaagaac
gccgagcgcgaagcgctgttcgacgcgttccggcgcggcgagatctccacgctggtggtc
agcaaggtcgccaacttctccatcgacctgccggaagcgtctgtggccgttcaggtttcg
ggaaccttcggatcccgccaggaggaagcgcagcggctgggccggctgctgcggcccaag
cacgacggcggcggcgcggtgttctactcggtggtgtcgcgcgattcgctggacgccgag
tacgcggcgcaccggcagcggttcctggccgagcagggctacggctacatcatcaaggac
gccgacgatctgctggggccggcgatatga
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