Mycolicibacterium mageritense: MMAGJ_26720
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Entry
MMAGJ_26720 CDS
T07395
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mmat
Mycolicibacterium mageritense
Brite
KEGG Orthology (KO) [BR:
mmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmat03019
]
MMAGJ_26720 (hrpA)
Enzymes [BR:
mmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MMAGJ_26720 (hrpA)
Messenger RNA biogenesis [BR:
mmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MMAGJ_26720 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND_NTPase5
NACHT
T2SSE
nSTAND3
ABC_tran
PhoH
Motif
Other DBs
NCBI-ProteinID:
BBX33390
UniProt:
A0ABM7HS60
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All DBs
Position
2796870..2800757
Genome browser
AA seq
1295 aa
AA seq
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MSEPSVAELRSRLDALTIRDADRLRRRLRNLSGGDTTKIAEQVAAAEGLVLTRQAAVPAI
TYPDLPVSEHRDELAKAINENQVVVVAGATGSGKTTQLPKICLDLGRGIRGTIGHTQPRR
LAARTVAQRIADELGTPLGDTVGYTVRFTDQASDRTLIKLMTDGILLAEIQRDRRLLRYD
TLILDEAHERSLNIDFLLGYLRELLPRRPDLKVIVTSATIEPERFSRHFSDAPIVEVSGR
TYPVEIRYRPLEVPVAADDADDPDDPDHEVVRTEMRDPTEAIIDAVAELEAEPPGDVLVF
LSGEREIRDTSEALRAVVGQNTEVLPLYARLPTADQQKVFQPSHATRRIVLATNVAETSL
TVPGIRYVVDPGTARISRYSRRTKVQRLPIEPISQASAAQRAGRSGRTAPGVCIRLYSEE
DFESRPRYTDPEILRTNLAAVILQMAALQLGDIAEFPFLDPPDARSVRDGVQLLQELGAF
DAAGALTDVGRRLARLPLDPRIGRMILAADAEGCVREVLIIAAALSIPDPRERPVDREEA
ARQKHARFADEHSDFVSYLNLWSYLSEQRKERSGNAFRRMCREEFLHYLRIREWQDLVGQ
LRSIARDIGITESDEPADPARIHAALTAGLLSHVGLREGDGRDYAGARNSKFVLAPGSVL
TKKPPRWIVVADLVETSRLFGRIAARIEPEAIERVAGHLVQRTYSEPHWDARRGAVMAFE
RVTLYGLPLVPRRRVGYAQIDPPVARELFIRHALVEGDWQTRHHFFRDNARLRAELEEME
ERARRRDLLVGDDDIYALYDARIPADIVSARHFDAWWKKQRHKTPDLLTFTRDDLLRSDD
SAEHPDTWQADDLNLPLTYRFEPGAADDGVTVHVPVGVLARLGGDGFAWQVPALREELVT
ALIKSLPKDLRRNFVPAPDTARAILGDLDPTAGSLLDEVQRELRRRSGILVPIDAFDLDK
IPNHLRMTFAVEAADGREVARGKDIDALREQLSVPVAQAVAAAVAGELERTGLRSWPDDL
DELPRTVENVSGGHTVRGYPAFVDTGKAVDIKVFANPAEQAAAMRPGLRRLLRLTVPSPV
KAIERGLGTRTRLALNANPDGTLAALLDDCADAAADLMVPKPVWTRAAFADLVQRAGKEL
GPTTQAAVSRVEKVLAASHEVRVALPDKPSPAQADAVADIRSQLDRLLPKGFVTATGVGR
LNDLTRYLTAIARRLDRLPHALGADRDRMSRIHAVEDAYDELVQALSPVRASADDVRDIA
WQIEELRVSLWAQQLGTPRPVSEQRIYKAIDAVGR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgtcagtcgccgagctccgctcccgcctcgacgcactgaccatccgtgac
gccgaccggctgcgccgccgcctgcggaacctgagcggtggggacaccaccaagatcgcc
gaacaggtcgccgcggcagaaggactcgtcctcaccaggcaggccgccgtcccggcgatc
acctaccccgacctgcccgtcagtgagcaccgcgatgagctggccaaggccatcaacgag
aaccaggtggtggtggtcgcgggcgcgacgggctcgggcaagaccactcagctgccgaag
atctgcctggacctcggccgcggcatccgcgggaccatcggacacacgcagccccggcgg
ctggcggcgcgcaccgttgcgcagcgcatcgccgacgagctcggcaccccgctcggcgac
accgtcggctacaccgtgcgcttcaccgatcaggcgagcgaccgcacgctgatcaagttg
atgacggacggcattctgctcgccgagatccaaagggaccggcggctgctgcgttacgac
acgctgatcctcgacgaggcgcacgagcgcagcctcaacatcgacttcctgctcggctac
ctgcgtgagctccttccgcgcagacccgacctcaaggtcatcgtgacgtcggcgaccatt
gagcccgaacgcttttcgaggcacttctccgatgcgccgatcgtcgaggtgtcgggccgc
acctaccccgtcgagatccggtaccggccgctcgaggtgcccgttgcggcagacgacgcc
gatgatcccgacgatcccgaccacgaggtcgtgcgcaccgagatgcgtgatccgaccgaa
gcgatcatcgacgcggtcgccgagctggaagccgaaccgcccggcgacgttctggtgttc
ctgtccggggaacgggaaatccgggacaccagtgaagcactgcgggccgtggtcggccag
aacaccgaggtgctaccgctgtatgcacggctgccgaccgcagatcagcagaaggtcttc
cagcccagccacgcgacgaggcgaatcgtgttggccaccaacgtcgccgaaacctcgctg
acggtgccgggtatccgctacgtcgtcgaccccggcaccgcgcggatctcgcgctacagc
cgtcgcaccaaggtgcagcgcctgccgatcgaaccgatctcgcaggcttcggccgcgcag
cgggcaggccggtcgggccgcaccgcgcccggcgtgtgcatccggttgtattcggaggag
gatttcgaatccaggccccgctacaccgatccggagatcctgcggaccaacctcgcggcg
gtcatcctgcagatggccgccttgcaactcggggatatcgcggagttcccgttcctggat
ccgcccgacgcgcgcagcgtccgcgacggcgtgcagctgctgcaggaactcggtgctttc
gatgccgcaggggcactgaccgatgtcgggcgccggctggcccggctgccgttggatccg
cgcatcggccgcatgatcctggccgccgacgccgagggttgcgtgcgtgaggtgctgatc
atcgccgcggcgctgtccatccccgacccgcgggaacggccggtcgaccgtgaggaggca
gcgcggcagaagcatgcgcggttcgcggatgagcactcggatttcgtctcgtacctcaac
ctgtggagctacctgagtgagcagcgaaaggagaggtcgggcaacgcgttccgccggatg
tgccgcgaggagttcctgcactatctgcggatccgggagtggcaggatctggtcgggcag
ttgcggagcatcgcgcgggacatcggcattaccgagtccgacgagccggccgacccggcg
cgcatccacgccgcgctgaccgcgggcctgctgtcccacgtcgggctgcgcgagggtgac
ggccgcgactatgccggcgcccgcaacagcaagttcgtgctggctcccggttcggtgctg
accaagaagccgccgcgctggatcgtggtcgccgacctggtggagaccagcaggctgttc
ggccggatcgcggcgcggatcgagccggaagccatcgaacgggtcgcgggacacctggtc
cagcgcacctacagtgagccgcattgggatgccaggcgcggtgcggtgatggcgttcgag
cgcgtcacgctctacggattgccgctcgtgccgcggcggcgggtcggctacgcgcagatc
gacccgccggtcgccagggagctgttcatccgccatgccctcgtcgaaggcgactggcag
acccgccaccatttcttccgggacaacgcccgcttgcgggccgagctcgaggagatggaa
gagcgggctcgccggcgcgatctcctggtgggtgacgacgacatctacgcgctctacgac
gcgcggatccccgccgacatcgtctcggcccggcacttcgacgcgtggtggaagaagcag
cggcacaagacacccgacctgctcaccttcacccgcgacgacctgctgcggtccgacgat
tcggccgagcatcccgacacctggcaggccgacgacctgaacctgccgctgacctacagg
ttcgaaccgggggcggccgacgacggcgtgaccgtgcatgtgccagtcggagtgctggcg
cggttgggtggcgatggattcgcctggcaggtgcctgcactgcgggaagaactggtgaca
gcgctgatcaagtcgttgccgaaagacctgcggcgcaacttcgttcccgcgccggacacc
gcgagggccatcctcggtgacctggatcccacggccggctcgctgctcgacgaggtccag
cgcgaactacgcaggcgcagcggcattctggtgccgatcgacgcgttcgacctggacaag
atccccaaccacctccggatgacgttcgcggtggaggcggccgacggtagagaagtcgca
cgcggcaaggacatcgacgcgctgcgcgagcagctgtcggtaccggtcgcgcaggccgtc
gccgccgcggtggcgggcgagctggagcgtacggggttgcggtcctggccagacgatctc
gacgaactgccccgcacggtcgagaacgtcagcggtgggcacaccgtgcgcggctatccc
gcgttcgtcgacaccggaaaagccgtggacatcaaggtgttcgcgaatcccgccgaacag
gccgcggcgatgcgaccgggcctgcggcggctgctgcggctcacggtgccctcgcccgtc
aaggccatcgagcgaggcctgggtacgcgaacccggttggccctcaacgccaatcccgac
ggcacccttgccgcgctgctcgacgactgtgccgacgccgcggccgacctgatggtcccg
aaaccggtgtggaccagggccgcgttcgctgatttggtgcagcgggccggaaaggaacta
gggcccaccacacaggccgcggtgagccgggtcgagaaggtgctggcggcttcgcacgaa
gtgcgggtcgcgctgccagacaagccgtcgcccgcgcaggccgacgcggtggccgacatc
cgttcgcagctggatcggttgctgcccaaggggtttgtcacggctaccggagtcggcagg
ctcaacgacctgacgcgctacctcaccgcgatcgcccgccggttggaccggctgccgcac
gcccttggcgccgaccgggatcggatgtcgcgcatacacgccgtcgaagacgcctatgac
gaactggtgcaggcgctttcgccggtgcgggcctcggccgacgacgtccgtgacatcgcg
tggcagatcgaggaactccgggtgagcctgtgggcccagcagctgggaacccctcgaccg
gtcagtgagcaacgcatctacaaggcgattgacgccgtcgggcgctga
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