Mycolicibacterium mageritense: MMAGJ_34870
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Entry
MMAGJ_34870 CDS
T07395
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmat
Mycolicibacterium mageritense
Pathway
mmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAGJ_34870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmat03019
]
MMAGJ_34870
03400 DNA repair and recombination proteins [BR:
mmat03400
]
MMAGJ_34870
Enzymes [BR:
mmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMAGJ_34870
Messenger RNA biogenesis [BR:
mmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMAGJ_34870
DNA repair and recombination proteins [BR:
mmat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMAGJ_34870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
UPRTase
Pribosyl_synth
Motif
Other DBs
NCBI-ProteinID:
BBX34205
LinkDB
All DBs
Position
3593589..3595664
Genome browser
AA seq
691 aa
AA seq
DB search
MATREQAQSILEQLAGPAASLRDDQWTAIEALVVQRRQALVVQRTGWGKSAVYFIAAKLL
RGAGRGPTVIVSPLLALMRNQVAAAERAGVRAATINSGNVTEWSAIHQQVADGELDVLLV
SPERLNNPDFRDNVLPALAADAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIGELGSDIPV
LATTATANDRVVNDVAAQLGVGGRDTVVLRGGLDRESLRLAVVHAGNPAQRAAWIAAQLD
SLPGSGIVYTLTVAQAHDVAALLREQGHQVAAYTGSTDTSEREQLEADLLNNRVKALIAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATESAEVILLPGAEDQDVWRYFAS
VAFPSESMVRNVLRALEPDRPQSTPALEALVDLNRSRLEMVLKVLDVDGAVRRVKGGWIG
TGQPWEYDEERYRALDEARKREQQAMLDYQRTDGCRMAFLRGQLDDPEIQPGERCGRCDN
CTGTRYDTRVDEGTLATTAERLRRPGVDVAPRKQWPSGLAALGLELSGRISGGAAPGRAI
GRLTDLGWGARLRRLLAEPDQEVPDDVVQAAVAVLKAWDWKARPVAVIGLDSETHPRLIS
STVQRLAQLGRLTDLGTLRYAPQRRPATAANSAYRVAALHGAWEAPDITVDGPVLLVDDM
TDTGWTLTMAARVLRDAGAPEVLPFVLASTS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgcgaacaggcccagtcgatcctcgaacaactcgccgggcccgcggcgtcg
ctacgtgacgatcagtggacggccatcgaggcgctcgtcgtgcagcgccgtcaggcgttg
gtggtgcagcgcacgggctggggaaagtccgcggtgtacttcatcgcggccaagctgttg
cgtggtgccgggcgtggcccgaccgtgatcgtgtcgccgctgctggcgttgatgcgcaac
caggtggccgcggccgaacgcgccggggtgcgtgcggcgaccatcaattcgggcaacgtc
accgagtggtcggcgattcatcagcaggtggccgacggcgaactcgacgttctgctggtc
agcccggaacggttgaacaatcccgattttcgcgacaatgtgctgcccgccctggcggcc
gacgccggtctggtggtggtcgacgaggcgcactgtgtttccgattggggccatgacttc
cgccccgactaccggcgcatccgcacgttgatcggcgagttgggttccgacatcccggtt
ctcgccaccaccgcgacagccaacgaccgcgtggtcaacgacgtcgcggcccagttgggt
gtcgggggtcgcgacaccgtggtgctgcgtggcggcctggaccgcgagtcgctccggctg
gccgttgtgcacgcgggcaaccccgcgcagcgtgcggcttggattgccgcgcaactggat
tcgttgcccggttcgggcatcgtctacacgctgacggttgcgcaggcccatgatgtcgcg
gcgctgctgcgtgagcagggccatcaggtcgcggcctacacgggttcgactgacacctcc
gaacgcgaacagctggaagccgacctgctgaacaaccgggtcaaggcgctcatcgcgacg
tcggcgctcgggatgggtttcgacaaaccggatctcggtttcgtcgtacacctgggcgca
ccgtcctcgccgatcgcgtactaccaacaggtcggccgtgccggccgcgcgaccgaaagc
gccgaggtgatcctgctgcccggcgccgaggaccaggacgtgtggcggtattttgcgtcg
gtggcattcccgtcggaatccatggtgcgcaacgtgcttcgcgcactcgaacccgaccgg
ccgcagtcgacacccgcgctggaggcgctggtggacctcaaccggtcacgcctggagatg
gtgctcaaggtgctcgacgtcgacggtgcggtgcggcgcgtcaaaggcgggtggatcggc
accggccaaccctgggagtacgacgaggaacggtaccgcgcactcgacgaggcccggaaa
cgcgaacagcaggcgatgctggactatcaacgcaccgatggatgccgaatggctttcctg
cgtggacaactcgatgatccggaaatacagccgggcgagcggtgcggccgctgcgacaac
tgcacaggaactcgttacgacacgagggtcgacgaaggcactctggccaccaccgcggaa
cggctgcgcaggcctggcgtcgatgtggcgccccgcaagcagtggccctccgggctggcc
gcgctcgggctcgaactgtccggacgcatctccggtggggccgcgcctgggcgggccatc
ggcaggctcaccgacctgggctggggtgcgcggctacgtcggctgctggccgaacccgac
caggaggtgcccgacgatgtggtgcaggccgccgtcgcggtactcaaggcctgggactgg
aaagcccgcccggtggccgtcatcgggctggactccgagacccacccgcggctgatctcc
tcgaccgtgcagcgtctcgcgcaactcggccggctgacggatctgggcacgttgcgttat
gcgccgcagcggcggcccgcaaccgccgccaactcggcataccgggttgccgcattgcac
ggggcttgggaggcaccggacatcaccgtcgacggcccggtgctgctggtcgacgacatg
accgacaccggctggacgctgaccatggcggcgcgggtgttgcgggatgccggtgcgcca
gaggtgctgccgttcgtgctggccagcaccagttaa
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