Mycolicibacterium mageritense: MMAGJ_47040
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Entry
MMAGJ_47040 CDS
T07395
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmat
Mycolicibacterium mageritense
Brite
KEGG Orthology (KO) [BR:
mmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmat03032
]
MMAGJ_47040
03400 DNA repair and recombination proteins [BR:
mmat03400
]
MMAGJ_47040
Enzymes [BR:
mmat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MMAGJ_47040
DNA replication proteins [BR:
mmat03032
]
Prokaryotic type
DNA Topoisomerases
MMAGJ_47040
DNA repair and recombination proteins [BR:
mmat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MMAGJ_47040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BBX35422
LinkDB
All DBs
Position
complement(4820833..4821846)
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AA seq
337 aa
AA seq
DB search
MRLRRSVVAEPGLRRVRRGRGFSYQDTDGRAVTDPATLARIEDLVIPPAWKNVWICPHPN
GHIQAVGTDVAGRRQYLYHQRWSEERSEEKFDRVLQLSAALPDWREQIAGDLRTRGFVRE
RVLAVGLRLLDLGYFRAGGDQYAEENNSFGIATLLGEHVTVHADTVEFDYPAKSGVRRTL
TVEDPEIVRAVTALRRRAGREQRLLAYRNSTGFVDIHAEDLNARFKEMVGDDYTVKDLRT
WHGTVLAAEGFATADPPVAEKVVKRVESAVMREVADALGNTPAVARSSYVDPRVIEGYRD
GLTIAAGLRRAARVRATDKRQSLLESSTARLIRKVNR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgcgccgcagcgtggtagccgaacctgggctgcgccgggtgcgccgaggccgt
ggcttcagttatcaggacaccgacggccgagcggttaccgaccccgcgaccctggcccgt
atcgaggatctcgtgatccccccggcgtggaagaacgtgtggatctgccctcatcccaac
ggacacatccaagccgtgggcaccgacgtcgcggggcgccgacagtacctgtaccaccag
cgatggagcgaggagcgcagcgaggagaagttcgaccgggtgctgcaactgtcggcggca
ctacccgattggcgcgaacagatcgccggcgatctccggacccggggcttcgtccgggag
cgcgtgctggccgtcggcctgcgcctgctcgatctcggctattttcgcgcaggcggcgac
caatacgccgaggagaacaactctttcggtatcgcgaccctgctcggggaacacgtcacg
gtgcacgccgacaccgttgagttcgactatccggcgaagagcggagtgcgccgcactctg
accgtcgaagaccctgagatcgtgcgggccgtcacggcgctgcggcgccgggcgggtcgc
gagcaacggttgctcgcgtaccgcaactcgacgggcttcgtcgacattcatgcggaggat
ctcaacgcgaggttcaaggagatggtgggcgacgactacaccgtcaaggatctgcgcacc
tggcacggcacggtactggctgccgaagggttcgccacggccgatccgccggttgccgag
aaagtggtcaaacgcgtcgaatcggccgtcatgcgtgaggtcgccgacgccttgggcaac
acaccggccgtggcgcgcagctcatatgtcgacccccgggtgatcgaggggtaccgcgac
ggcctcacgatcgcggcgggtttgcgccgggccgcgcgcgtccgagccaccgacaagcgg
caatccctactggaaagcagcaccgcccggttgatccgcaaagtgaaccgttag
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