Mycolicibacterium mageritense: MMAGJ_47160
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Entry
MMAGJ_47160 CDS
T07395
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mmat
Mycolicibacterium mageritense
Brite
KEGG Orthology (KO) [BR:
mmat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmat03021
]
MMAGJ_47160
Transcription machinery [BR:
mmat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MMAGJ_47160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
HTH_24
Sigma70_ECF
HTH_Crp_2
MarR_2
HTH_3
DUF7343
KORA
HTH_IclR
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BBX35434
LinkDB
All DBs
Position
4827333..4828085
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AA seq
250 aa
AA seq
DB search
MTSEYADVLVMFRELQGMTEESPQYSHQRERIVERCLPLADHIARRFDGRGEPREDLVQV
ARVGLVNAINRFDVETGSDFVSFAVPTIMGEVRRYFRDNSWSVKVPRRLKELHLRLGAAT
AELSQRLGRAPTATELADELEMDRDEVVEGLIAGSSYNTLSIDSGGGGDEDAPAIVDTLG
DVDTRMDQIENREALRPLLAQLPERERTVLLLRFFESMTQTQIAERVGISQMHVSRLLAK
SLARLRDQLQ
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcggaatacgcggacgtcctggtcatgttccgcgagctgcaggggatgaccgag
gaatcaccgcagtactcgcatcagcgcgaacggatcgtggagcggtgcctgccgttggcc
gatcacatcgcgcgccgtttcgatggccggggtgagccccgggaggatctcgtgcaggtc
gcgcgggtcggtctggtgaatgccatcaatcgattcgacgtcgaaaccggttctgatttc
gtgtcattcgccgtaccgaccatcatgggtgaggttcggcggtacttccgggacaacagc
tggtcggtcaaggtgccgcggcgcctcaaagaactgcatctgcgtcttggcgcggcgacc
gcggagctgtcgcaacgtctgggccgcgcaccgacggccacggagctggccgacgaactc
gaaatggaccgggacgaggttgtcgaaggtctgatcgcaggcagttcgtacaacaccctg
tcgatcgacagcgggggaggcggtgacgaagatgcgcccgccatcgtcgacacgctcggt
gacgtcgacacgcgcatggatcagatcgagaatcgtgaggcgctgcgaccgctgttggct
cagctgccggagcgtgagcgcaccgtgctgctgttgcgctttttcgagtcgatgacgcag
acgcagatcgccgagcgggtcgggatatcccagatgcacgtgtcgcggctgctcgcgaaa
tcgctagcgcgacttcgcgaccagctgcagtaa
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