Mycolicibacterium mageritense: MMAGJ_56910
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Entry
MMAGJ_56910 CDS
T07395
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mmat
Mycolicibacterium mageritense
Pathway
mmat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMAGJ_56910 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmat03019
]
MMAGJ_56910 (rnj)
Messenger RNA biogenesis [BR:
mmat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MMAGJ_56910 (rnj)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBX36409
UniProt:
A0AAI8TUJ3
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All DBs
Position
5816142..5817818
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AA seq
558 aa
AA seq
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MSTDLAPPAPLAPGGLRVTALGGISEIGRNMTVFEHLGRLLIVDCGVLFPGHDEPGVDLI
LPDLRHIEHRLDDVEALVVTHAHEDHIGAIPFLLKLRPDIPVVGSKFTIALVREKCREHR
IKPVFVEVAERQSSTHGVFECEYFAVNHSIPGCLAVAIHTGAGTVLHTGDIKLDQMPLDG
RPTDLPGMSRLGDAGVDLFLCDSTNSEHPGVSPSESEVGPTLHRLIRGAEGRVIVACFAS
NVDRVQQIIDAAVALGRRVSFVGRSMVRNLGIARELGYLRVDDSDILDIGAAEMMPADKV
VLITTGTQGEPMAALSRMSRGEHRSITLTDGDLIILSSSLIPGNEEAVYGVIDALAKIGA
RVVTNAQARVHVSGHAYSGELLFLYNGVRPRNVMPVHGTWRHLRANAALAARTGVPPENI
VLAENGVSVDLVAGKASISGAVAVGKMFVDGLITGDVGDATLGERLILSSGFVAVTVVVH
RGTGRPAGPAHLQARGFSEDPKALEPVAQKVERELESLAADNVTDPTRIAQAVRRTVGKW
VGETYRRQPMIVPTVIEI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgacctcgcaccgcccgcgccgctggctcccggcggcctgcgggtcaccgcg
ctcggcggcatcagcgaaatcggccgcaacatgacggttttcgagcatctcggccgattg
ctgatcgtcgactgcggggtgctcttccccgggcacgacgagccgggggtggatctgatc
ctgccggacctgcggcacatcgagcaccggctggacgacgtcgaggcgcttgtcgtcacc
cacgctcacgaggaccacatcggggccatcccgttcctgctcaagctcaggcccgatatt
ccggtggtcggttcgaagttcaccatcgcgctggtccgcgagaagtgtcgtgagcaccgc
atcaagcccgttttcgtcgaggtcgccgagcggcagagcagcacgcacggcgtcttcgaa
tgcgagtacttcgccgtcaaccactcgatccctgggtgtttggccgtggccatccacacc
ggtgcgggcacggtgttgcacacgggcgacatcaagctcgaccagatgcccctggacggt
cggccgacggatctgcccggcatgtcgcggctcggcgatgccggtgtggacctgttcctg
tgcgattcgaccaactccgagcatccgggcgtgagcccgtcggaaagcgaagtgggcccg
acgctgcaccgcctgatccggggcgccgaaggccgggtgatcgtcgcgtgcttcgcgtcc
aacgtcgatcgggtgcaacagatcatcgacgccgcggtggcgctcgggcggcgcgtgtcg
ttcgtcggacgttccatggtgcgcaacctgggcatcgcgcgggagctcgggtatctgcgc
gtcgacgattccgacatcctcgacatcggggcggccgagatgatgccggctgacaaggtc
gtgctgatcaccacgggaacccagggcgagcccatggccgcgctgtcgcggatgtcacgc
ggtgagcaccgcagcatcaccttgaccgatggcgacctgatcatcctgtcgtcctcgctg
atcccgggcaatgaggaggccgtctatggtgtcatcgacgcactggccaagatcggtgcc
cgcgtcgtcaccaatgcgcaagcgcgcgtgcatgtttcgggtcacgcctactcgggtgag
ctgctgttcctctacaacggagtgcggccccgcaatgtgatgccggtccacggcacctgg
cggcatctgcgggccaatgccgcgctggccgcccgcaccggggtgccgccggagaacatc
gtgctcgccgagaacggtgtcagcgttgacctggtggcaggcaaggcctcgatctccggg
gccgtcgcggtgggcaagatgttcgtcgacggcttgatcaccggcgacgtcggagatgcg
acactgggtgaaaggctcatcctgtcttcgggtttcgtcgccgtcaccgtggtcgtacac
cgtggcaccggcaggcctgccggcccggcccacctgcaggctcgcggtttctccgaggat
cccaaggcgctggagccggtcgcgcagaaggtcgagcgcgaactggaaagccttgccgcc
gacaacgtcacggacccgacccggattgcccaggcggtgcgccgcacggtcggcaagtgg
gtgggcgaaacctaccggcggcagccgatgatcgtgcccaccgtcatcgagatctaa
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