Mycolicibacterium mageritense: MMAGJ_61970
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Entry
MMAGJ_61970 CDS
T07395
Symbol
dnaE1
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmat
Mycolicibacterium mageritense
Pathway
mmat03030
DNA replication
mmat03430
Mismatch repair
mmat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMAGJ_61970 (dnaE1)
03430 Mismatch repair
MMAGJ_61970 (dnaE1)
03440 Homologous recombination
MMAGJ_61970 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmat03032
]
MMAGJ_61970 (dnaE1)
03400 DNA repair and recombination proteins [BR:
mmat03400
]
MMAGJ_61970 (dnaE1)
Enzymes [BR:
mmat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMAGJ_61970 (dnaE1)
DNA replication proteins [BR:
mmat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MMAGJ_61970 (dnaE1)
DNA repair and recombination proteins [BR:
mmat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MMAGJ_61970 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BBX36915
LinkDB
All DBs
Position
6344870..6348415
Genome browser
AA seq
1181 aa
AA seq
DB search
MSGSSSRSFVHLHNHTEYSMLDGAAKITPMLAEAQRLGMSAIGMTDHGNMFGASEFYNSA
TKAGIKPIIGVEAYIAPGSRFDTKRVQWGDPSQKSDDVSGSGAYTHMTMVAETATGLRNL
FKLSSLASFEGQLGKWSRMDAELIAEHAEGIIATTGCPSGEVQTRLRLGHRQEALEAAAK
WRDIFGPDNFFLELMDHGLDIERRVREGLLEIGQKLKIPPLATNDCHYVTREASQNHEAL
LCIQTGKTLSDPNRFKFDGDGYFLKSAEEMRALWDAQVPGACDSTVLIGERVQSYADVWT
PTDRMPVFPVPDGHDQASWLTHEVTAGLQRRFRGGPVPPEYTERASYEIKVICDKGFPSY
FLIVADLINYARSVDIRVGPGRGSAAGSLVAYALGITNIDPIPHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMLRYAANKWGSDRVAQVITFGTIKTKAALKDSARVHYGQPGFAIADR
ITKALPPPIMAKDIPLSGITDPNHERYKEAAEVRTLIDTDPDVRTIYETARGLEGLVRNA
GVHACAVIMSSEPLVDAIPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTIIGDC
IDNIKANRGIDLDLETLPFDDPAAYELLGRGDTLGVFQLDGGPMRDLLRRMQPTGFNDIV
AVLALYRPGPMGMNAHNDYADRKNGRQAIKPIHPELEEPLKDILAETYGLIVYQEQIMFI
AQKVASYTMGKADALRKAMGKKKLEVLEAEYKGFKEGMTANGFSEGAVKALWDTILPFAG
YAFNKSHAAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGITVLP
PDVNESVQNFASVGDDIRFGLGAIRNVGANVVASLINTRTEKGKYTDFSDYLNKIDIAAC
NKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDSVLGTKKAEAMGQFDLFGGGDDTGTDA
VFTIKVPDEEWEDKHKLALEREMLGLYVSGHPLNGVAHLLANQVDTQIPAILDGDVANDA
QVLVGGILASVNRRVNKNGLPWASAQLEDLTGGIEVLFFPQTYSLFGAEIADDVVVLVKA
KVAARDDRIALIAHELVVPDFTSAQADRPLAVSLPTRQCTIDKVSALKSVLANHPGTAQV
HLRLISGERITTLELDQSLRVTPSSALMGDLKALLGPGCLG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttcatcttcgcggtccttcgtgcacctgcataaccacaccgaatactcgatg
ctcgacggcgccgcgaagatcactccgatgctggccgaggcgcagcgcctcggcatgtcg
gcgatcggcatgaccgaccacggaaacatgttcggcgccagtgagttctacaactcggcg
accaaggccggcatcaagccgatcatcggcgtcgaggcctacatcgcgcccggctcccgg
ttcgacaccaagcgcgttcaatggggcgatccgagccagaagagcgacgacgtctcgggt
agcggcgcctacacccacatgaccatggtcgccgagaccgccaccggcctgcgcaacctg
ttcaagctgtcgtcgctggcatcgttcgaaggtcagctcggcaagtggtcgcgcatggat
gccgagctcatcgccgagcacgccgagggcatcatcgcgaccaccggctgcccgtccggc
gaggtgcagacccggctgcggctcggtcatcggcaggaggcgctggaagcggcggccaag
tggcgcgacatcttcggcccggacaatttcttcctcgagctcatggaccacggcctcgac
atcgagcgccgggtccgcgagggtctgctcgaaatcgggcagaagctcaagatcccgccg
ctggcgaccaacgactgccactacgtgacgcgcgaggcctcgcagaatcacgaggcgctg
ctgtgcatccagaccggcaagaccctgtccgacccgaaccggttcaagttcgacggagac
ggctacttcctcaagtccgccgaggaaatgcgcgccctgtgggacgctcaggtgcccggt
gcgtgtgattcgacggtgctcatcggcgagcgcgtgcagtcctacgccgacgtgtggacg
ccgaccgaccggatgccggtgttcccggtgcccgacggacacgaccaggcttcctggctg
acacacgaggtgacggcggggctgcaacggcggttccggggcggtcccgtgccccccgag
tacaccgaacgggcgagctatgagatcaaggtcatctgcgacaaaggcttcccgtcctac
ttcctgatcgtcgccgacctgatcaactacgcgcgctcggtcgacatccgggttgggccg
ggccgcggttcggccgccgggtcactggtggcctacgcactgggcatcaccaacatcgac
ccgattccgcacggcctgctgttcgaacgcttcctcaacccggaacgcccgtcggccccc
gatatcgacatcgacttcgacgatcgtcgccggggcgagatgctgcggtacgcggccaac
aagtggggcagcgaccgggtcgcccaggtcatcaccttcggcaccatcaagaccaaagcg
gcgctgaaggattcggcccgcgtgcactacggccagccgggcttcgcgatcgccgaccgg
atcaccaaggcactgccgccgcccatcatggcgaaggacatcccgctgtcgggcatcacc
gatccgaaccacgagcggtacaaggaagccgcggaagtccgcacgctgatcgacaccgac
cccgatgtgcggaccatctacgagacggcccgcgggctcgagggcctggtccgcaacgcg
ggtgtgcacgcgtgtgcggtgatcatgagctccgagccgctcgtcgacgcgatcccgctg
tggaaacgaccacaggacggcgcgatcatcacgggctgggactatccgtcgtgcgaggcc
atcggcctgctgaagatggacttccttggcctgcggaacctgacgatcatcggtgactgc
atcgacaacatcaaggccaaccgcggcatcgacctggacctcgaaacgttgccgttcgac
gacccggcggcatacgaactgctgggccgtggcgacacgctcggtgtgttccagctcgac
ggtggccccatgcgcgatctgctgcgccgcatgcagcccaccgggttcaacgacatcgtg
gccgtgctggcgctgtaccgtcccggccccatgggcatgaacgcccacaacgactacgcc
gaccgcaagaacggccggcaggccatcaagccgatccaccccgaactcgaagagccgctc
aaggacatcctcgccgagacctacggccttatcgtctaccaagagcagatcatgttcatc
gcgcagaaggtcgcctcctacaccatgggcaaggccgatgcgctgcgtaaggccatgggt
aagaagaagctggaggtgctcgaggccgagtacaagggcttcaaggagggcatgacggcc
aacggcttctccgaaggtgcggtgaaggcgttgtgggacaccatccttccgttcgccggc
tacgcattcaacaagtcgcacgcggccgggtacgggctggtgtcgtactggaccgcgtac
ctcaaggcgaactacccggccgagtacatggccggcctgctgacgtctgtcggtgacgac
aaggacaaggccgcggtctacctcgccgactgccgcaggctcggcatcacggtgctcccg
ccggacgtcaacgagtccgtgcagaacttcgcctcggtgggcgacgacatccggttcggc
ctcggcgcgatccggaacgtcggtgccaacgtcgttgcgtcactgatcaatacgcgcacc
gagaagggcaagtacaccgacttctccgactacctgaacaagatcgacatcgcggcctgc
aacaagaaggtcaccgagtcgctgatcaaggcgggcgcgttcgattcgctcggccatccg
cgcaagggcctgttcctggtccacaccgacgccgtggactcggtgctcggcaccaagaag
gccgaggcgatggggcagttcgacctgttcggcgggggtgacgacactggcaccgacgcg
gttttcaccatcaaagtgcccgacgaagagtgggaggacaagcacaagctcgcactcgaa
cgcgagatgctgggcctctacgtgtcggggcacccgctcaacggtgtcgcgcacctgctg
gccaatcaggtcgacacccagatcccggcgatcctggacggcgatgtcgccaatgacgcc
caggtgctcgtcggcggcatcctcgcctcggtcaaccggcgggtcaacaagaacggattg
ccctgggcctcagcgcaattggaagacctcacgggtggcatcgaggtgttgttcttcccg
cagacctactcgctgttcggtgccgagatcgccgacgacgtggtggtgctcgtcaaagcc
aaggtcgccgcgcgcgacgaccggatcgcgctgatcgcccacgaactggtggtgcccgac
ttcaccagcgcccaggccgaccggccgcttgcggtcagcctgccgacccggcagtgcacc
atcgacaaggtcagtgcgctcaaatcggtgttggccaaccatccgggcaccgcgcaggtg
cacctgcgcctgatcagcggtgagcggatcaccacgctcgagctcgatcagtcgctgcgc
gtgacaccgtcgtcggcgttgatgggcgacctcaaggcgctgctcgggccgggctgcctc
ggctga
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integrated database retrieval system
