Methanolobus mangrovi: RE476_04375
Help
Entry
RE476_04375 CDS
T09569
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mmav
Methanolobus mangrovi
Pathway
mmav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RE476_04375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmav03019
]
RE476_04375
Enzymes [BR:
mmav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RE476_04375
Messenger RNA biogenesis [BR:
mmav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RE476_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
P-loop_SecA
AAA_30
PTP-NADK
Utp25_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
WMW23072
UniProt:
A0AA51YHE4
LinkDB
All DBs
Position
complement(907416..908789)
Genome browser
AA seq
457 aa
AA seq
DB search
MSEKGYTTPTPIQNLSIPHLLSGKDMIGIAQTGTGKTAAFSLPILQNMSASYKSPRPGKP
RVLVLAPTRELAAQIGDSFATYGQFTRFKHTVVFGGVGQGPQVRALSRGVDILVATPGRL
LDLVDQGHVRLSGVEYFVLDEADRMLDMGFVNDVYKVVDLLPNNRQSLFYSATMSPEVSA
LARKLLTNPVTVEVTPQATTVERIEQFVFFVDSEDKNELLLQLLRGKHLECVLVFTRTKH
RANKVAQTLNKNKVPADAIHGNKSQTHRTKTLQDFRSGHLRVLVATDIAARGIDIPDISH
VINYDLPNVSESYVHRIGRTARAGADGTAFSFCSADERDFLRSIEKLTRMDIEVAEHNYH
SEKARNATGDEAKPAPRQQGKPRGSSGPKRSQGRGKKGEGKANKSKPMQSTGVRPSQGKS
VNKVSSSTGNRSNRGGSKTATKNHSASRSPGHSRGRQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaaaaagggtacactactcctacaccgatacagaacctctccataccacatttg
ttaagtggtaaggatatgatcggtatcgctcagacaggtacaggtaaaactgctgctttc
tcattaccaatccttcaaaacatgtctgcatcatacaagtcaccacgtcctggaaaacca
cgtgttcttgtactcgcacccaccagagagcttgcagcacagatcggagatagttttgca
acatatggccagttcacacgattcaagcacacagtcgtatttggtggcgttggccagggt
ccgcaggtaagagctctctcaaggggcgtagatatccttgtggcgactcctggcaggttg
cttgatcttgtcgaccagggacatgtaagactatccggtgtggagtattttgtccttgat
gaggcagacaggatgcttgacatgggctttgtcaatgatgtgtacaaggtcgttgactta
ctgccaaataaccgtcagtcacttttctattcagccactatgtccccggaagtatctgca
cttgccaggaaattgctaaccaatcctgttacagtagaggtaactccgcaggcgacaaca
gtagagcgcatagaacagttcgtattcttcgtggattctgaggataagaacgaattactt
ttgcagctcctgagaggcaaacatctggaatgtgttcttgtgttcacacgtacaaagcac
cgtgctaacaaggttgctcagacgcttaacaagaacaaggttcctgctgatgctattcat
ggtaacaagtcccagacccaccgtacaaagacacttcaggatttcaggtcaggacatctt
cgtgtgctggttgcaacggatatcgcagctcgtggaattgatattcctgacatatcacac
gtcataaactatgacctgccaaatgtctctgagagttacgtgcaccgtatagggcgtact
gcaagagcaggagctgatgggactgcattctctttctgttccgcagatgagcgtgatttc
cttagaagtattgaaaagctcaccagaatggatattgaggttgctgaacataattatcat
tcagaaaaggcaagaaatgccacaggtgatgaagcaaagccagccccgagacagcaagga
aaaccaaggggaagctccggacctaaaagaagtcagggccgaggtaaaaagggcgaaggt
aaagctaataaatccaagcctatgcaatccacgggcgtaaggccaagccagggtaagagc
gtgaacaaggttagcagcagtactggcaataggagcaataggggtggcagtaaaacagct
actaagaaccactctgcttcacgaagcccaggtcattcaagaggccgccagtag
DBGET
integrated database retrieval system
