Methanolobus mangrovi: RE476_05380
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Entry
RE476_05380 CDS
T09569
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmav
Methanolobus mangrovi
Brite
KEGG Orthology (KO) [BR:
mmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmav03032
]
RE476_05380
03400 DNA repair and recombination proteins [BR:
mmav03400
]
RE476_05380
Enzymes [BR:
mmav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RE476_05380
DNA replication proteins [BR:
mmav03032
]
Prokaryotic type
DNA Topoisomerases
RE476_05380
DNA repair and recombination proteins [BR:
mmav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RE476_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_2
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
WMW23262
UniProt:
A0AA51UHB9
LinkDB
All DBs
Position
complement(1119094..1121436)
Genome browser
AA seq
780 aa
AA seq
DB search
MSIVVFTEKNKAASQIAGILSGGHFNRASVEGVPVYDFKMNGKEWRIMGLAGHIMGYDFP
EQFNNWRECDPAILLDTDPVKNVTKKSYAAAISLLASGAEEVVLACDFDREGENIGFEAK
TIAEKVASFPVKRARFSSLSASEIKNAFANLVEPDYNMAMSAEARQILDLKMGAAFTRFM
TLAVREKARTKGVISIGPCQTPTCGFVYEREKLIKNFQSKDFWKIEAVFDANGTEFTGAH
RGGHISEKAKADELFARIKNCKKGLVDKKSVKQALTSPPYPLNTTEFLKRASKFLGISPE
NALEIAEQLYLSGFTSYPRTETNKYAEDFDFRSMLVAFSSGTYQRYALSIISAGEIKCRN
GTKDGHDHPPIHPIKAVSRDDVEKSVRMPDAWKVYDLIVRHFLANLMGPAVFEKTRFEIL
VGGEIFDVTGSVLRDAGWLEVYPFETKNDKLLPAIEEKEEVGVKEIKNIKSETTPPKRLT
EAELLTLMDKHGIGTKATAPSHIETNKKRGYFETKGKTILILDTGFTLMDTLDTTVSILV
KPEIRARIESLIQDVEDGKKTLDGALAEGTGLIKEMYSQLYSSKDAIAARMAGTITDEQV
TTDKKNFVGTCPECGRILHMIKTENGRFVGCTGYPGCKKTYPLPKTGALTVMRSQECSKG
GVAVLKVGNKYNWAVGIGPCFTCELEKKCFPPEVVGPCPVCDGSMFLISVKDSRFLGCTN
RCGHTQSVPKGGRLTVLSTLCEHCGWHMLRVKEKEKDAVEFCANRQCPGKKRISGRINQN
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattgtcgtattcacggaaaagaacaaggcagcttcccagatagcagggatctta
agcggaggacattttaatcgtgcttcagtggaaggtgttcctgtgtacgactttaaaatg
aatgggaaagaatggcggataatgggtcttgccggccatatcatgggttatgatttcccg
gagcagttcaataactggcgtgaatgcgatcctgcaatcctgctggatactgaccctgtt
aaaaatgtaactaaaaaatcatatgctgctgccatctcacttcttgcaagtggtgcggaa
gaagttgttcttgcctgcgactttgacagggaaggggagaatattggattcgaggcgaag
acaattgccgagaaagtagcttcttttccggttaaaagggcccgtttttcttcactatct
gccagtgagatcaaaaatgcttttgcaaatcttgttgaacctgactataatatggcaatg
tcagctgaagcccgccagatacttgacctgaagatgggtgctgcatttactcgtttcatg
acccttgcagtcagggaaaaggcccgcaccaagggtgttatttcaattggtccctgtcag
accccgacatgtggttttgtctatgagagggagaaactgataaagaacttccagtcaaag
gacttctggaagatcgaagctgttttcgatgcaaacggcacggaatttacaggcgctcac
aggggcgggcacatttctgagaaagcaaaagcagatgagctatttgccaggataaagaat
tgcaaaaaaggtcttgttgataaaaaaagtgtaaaacaggctctaacaagtcctccatat
ccgttgaataccactgagttcctgaaacgtgcttccaaattcctgggtatcagtcctgaa
aatgcccttgagatcgcagagcagctctatctttcagggtttacaagttatccaaggacc
gagactaacaaatatgccgaggattttgatttcaggtcaatgctggttgctttttcatca
ggcacttatcagaggtatgcactttcaataatctctgccggagaaataaaatgcagaaac
ggtaccaaagatggacatgaccatccccctatccatccaatcaaagcggtttcacgagat
gatgtagagaagagtgtcaggatgccggatgcgtggaaggtgtatgatctcattgtgaga
catttccttgcaaatctcatggggcctgccgtatttgagaaaacaagatttgagattctt
gttggtggtgaaatattcgatgtcacaggttctgtactcagggatgcaggatggcttgaa
gtttatccctttgaaaccaagaatgacaaattattgcccgctattgaggaaaaggaagag
gttggtgtaaaggagataaagaacattaaatccgagacaacccctcccaaaagacttact
gaggcagaattacttactttaatggacaagcatggcattggtactaaggcaacggctcca
agccatattgaaactaataagaaaagaggttattttgaaacaaagggaaagaccatctta
attcttgatacgggttttaccctgatggatacacttgatacgaccgtgtcgatacttgta
aaaccagagatcagggcccgtatagaatctctgatacaggatgttgaggatgggaaaaag
acacttgatggggctcttgcggaaggaaccggacttatcaaggaaatgtattcccagttg
tattcaagcaaggatgcaattgctgcaagaatggcaggcactatcactgatgagcaggta
actacggataagaagaactttgtgggtacatgtcctgaatgtggaaggatactgcatatg
atcaaaaccgagaacggaaggtttgtgggttgtaccggttatcctgggtgcaaaaagaca
tatcctctgccaaagactggtgcacttactgtcatgcgttcccaggagtgtagtaagggt
ggagtagctgttctcaaggtcggcaacaaatacaattgggctgttggaatcggtccctgt
tttacatgtgagttggaaaagaagtgtttcccaccggaagtcgttggtccttgtccggtt
tgtgatggttcgatgttccttatatctgtcaaagattctcgtttccttggttgtactaac
agatgcggacatacacagtcagtcccaaaaggaggcaggcttacggtcctcagtactcta
tgtgagcattgtggctggcacatgctgcgtgttaaagaaaaggaaaaggatgctgtagag
ttctgtgctaatcgccaatgcccgggtaaaaagcggatatctggaagaatcaatcaaaat
tga
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