KEGG   Methanolobus mangrovi: RE476_05575
Entry
RE476_05575       CDS       T09569                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mmav  Methanolobus mangrovi
Pathway
mmav03030  DNA replication
mmav03410  Base excision repair
mmav03420  Nucleotide excision repair
mmav03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RE476_05575
   03410 Base excision repair
    RE476_05575
   03420 Nucleotide excision repair
    RE476_05575
   03430 Mismatch repair
    RE476_05575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmav03032]
    RE476_05575
   03400 DNA repair and recombination proteins [BR:mmav03400]
    RE476_05575
Enzymes [BR:mmav01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     RE476_05575
    6.5.1.6  DNA ligase (ATP or NAD+)
     RE476_05575
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     RE476_05575
DNA replication proteins [BR:mmav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    RE476_05575
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     RE476_05575
DNA repair and recombination proteins [BR:mmav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     RE476_05575
   NER (nucleotide excision repair)
    Other NER factors
     RE476_05575
   MMR (mismatch excision repair)
    Other MMR factors
     RE476_05575
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: WMW23296
UniProt: A0AA51YHM0
LinkDB
Position
complement(1169564..1171255)
AA seq 563 aa
MTSFREFSQTCKVIESTSGSLDMVSLVAELLEKVTPEELPIVTHFVMGEIFPAWSSEEIG
VGAGILYNALAKSAGLAVSDIKGLVRETGDIGETAFRALKKVAGGQATFSSFLEESNDLS
ILEVFDRFKDISRSSGKGSQTAKIKNLQYLFNSSSPEEVGYIARLAVEELRIGVGEGIVR
DAISKAFDVPSDEVERAFMLTNDLGLVATTARNGGRDAVLSLGLELNRPIRMMLAQITPS
LDAALSDIGIAAVEWKFDGARVQIHKEGDNVTLFTRRLENITDSLPDIVEAVRENVSAES
AILDGEAVAIDENGRPRAFQDILKRFRRKYDVQSTAREIPLILNLFDIMYLNGEELLDLP
LTQRRAKLAACVKNGNEIRVDAQYLTDNPEKILEIYNDALKAGHEGVMIKNPDSPYSPGK
RGKNWLKKKPVMETLDLVVIGAEWGYGRRTSVLGSYALACHDPDTGRFLPVGRVATGFSD
EQLVELTELFSELIIVESGTEVEIKPEVIFEVAFEEIQKSVNYESGYALRFPRLVNVRSD
KSVEDVETIGRLEEMYLMQRERN
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgacaagtttcagagaattctctcagacctgtaaggttatcgagagtacttccggctcc
cttgatatggtttctctggttgctgaattacttgaaaaggtcactccagaggaacttcca
attgtaacccattttgtgatgggtgagattttccctgcatggagcagtgaagagataggt
gttggtgccggtatcctctataatgcccttgcaaaatcagcagggcttgcagtttctgat
atcaagggacttgtaagggaaactggcgatatcggtgagactgctttcagggcactaaaa
aaagttgcaggtggtcaggcaacgttctcttctttccttgaagaatccaatgatctttct
atccttgaggtctttgatagattcaaagatatttcaagatcatcgggaaaaggttcccag
acagctaaaataaagaaccttcaatatcttttcaattcatcctctcctgaagaggttggt
tacattgcccgccttgcagttgaagaactgagaattggcgttggcgagggaattgtcagg
gatgctatttccaaagcgtttgatgttccttccgatgaggttgaaagggctttcatgctt
accaatgacctcggacttgttgcaaccaccgcaagaaatggtggtagggatgcagtatta
tcacttggccttgaactcaaccgacccatacgtatgatgctggcccagataactccaagt
cttgatgcagctctttcagacataggcattgcggctgtagaatggaaatttgacggagca
agggttcagatacacaaggaaggcgacaatgttacgcttttcacccgcaggcttgagaat
atcacagactcccttccggatatcgtggaagcagtaagggaaaacgtaagtgctgaatcc
gcaatacttgatggtgaagcggtggccattgatgagaatggcaggccccgtgcattccag
gatatattgaaacggtttagaagaaaatacgatgtccagtcaacagcacgtgagattcct
cttatactcaacctttttgatattatgtatctaaatggcgaggaactgcttgaccttcca
ctcacccagaggagggcgaaacttgcagcatgcgttaaaaatggaaatgagatccgagtt
gacgcacagtatctgacggataatcctgaaaaaatactggagatatacaatgatgctctt
aaggccggacatgaaggtgtgatgataaagaacccggattctccttattctcctggaaaa
cgaggtaagaactggctcaagaagaaaccggtcatggaaactctggatctggttgttatc
ggggctgaatggggctacggccgacgtactagtgtcctcggttcctatgcgcttgcctgt
cacgaccctgatacagggcgtttcttgccagttggacgtgttgcaactggtttttccgac
gagcagcttgtagagctcacagaattgttctctgaactcattatagtagaatcggggaca
gaggtcgaaattaaacctgaggtcatctttgaggttgcctttgaagagatccagaaaagc
gttaactacgagtcaggttatgcgcttcggttccctcgtctggtaaatgtgaggtctgat
aagtccgttgaggatgttgagaccatcggacgccttgaagaaatgtacctgatgcagcgt
gaaaggaactga

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