Methanolobus mangrovi: RE476_06090
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Entry
RE476_06090 CDS
T09569
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mmav
Methanolobus mangrovi
Pathway
mmav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RE476_06090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmav03021
]
RE476_06090
Transcription machinery [BR:
mmav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
RE476_06090
Prokaryotic type
Archaeal type
TFB
RE476_06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_ribbon_LysW
Lar_restr_allev
DUF7577
A2L_zn_ribbon
Cas12f1-like_TNB
Zn_ribbon_PaaD
Ribosomal_S27e
Zn_ribbon_3
HTH_Tnp_ISL3
BRF2-like_C_cyclin_rpt
Zn_ribbon_IS1595
DZR
Trm112p
HTH_AsnC-type
HypA
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WMW23386
UniProt:
A0AA51YHQ0
LinkDB
All DBs
Position
1276509..1277522
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AA seq
337 aa
AA seq
DB search
MVEVERVRYSDTSEREKIRAMIKARKEKDKNLDVEKAKVQCPECGSRNLVQDYERAELVC
SDCGLVVDAEFVDEGPEWRAFDHDQRMKRSRVGAPMTYTIHDKGLSTMIDWRNRDSYGKS
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRTVRETAAVVYRKA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIGEVSRVSRKEIGRTYRFISRELSLK
LMPTSPIDYVPRFCSGLNLKGEVQSRGVEILRQASEKELTSGRGPTGVAAAAIYIASILC
GERRTQREVADVAGVTEVTIRNRYKELAEELDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagttgaaagggtacgatattccgatacttccgagagggagaagatacgtgca
atgattaaagcacgtaaagaaaaagataagaatttagatgtagaaaaagcgaaggtccag
tgtccggaatgtggaagccgtaaccttgtacaggactatgagagggcagagctcgtatgt
tctgactgtgggcttgtggtcgacgcagagtttgttgatgaaggacctgaatggcgtgct
ttcgatcatgaccagagaatgaagcgttcccgtgtgggcgcaccaatgacctacacgata
catgacaaaggtctgtctactatgatagactggagaaaccgtgactcatacggtaaatca
atttcatcaaagaacagggctcagctgtacaggctaagaaaatggcaacgtaggataaga
gtaagcaacgctacggaaaggaaccttgcattcgcactgtccgaacttgaccgtatggca
tcagctcttggtctgccaaggacagttcgtgaaactgccgctgtagtatataggaaagca
gtcgataagaacctcatccgtggaagaagtattgaaggtgttgcagcagcagcattgtat
gcagcatgccgccagtgcagtgtcccaaggacacttgacgagattggagaagtatcaagg
gtaagcaggaaagagatcggcaggacataccgtttcatttcaagagaactgtccctcaaa
ctcatgccaacctcaccaatagattatgtcccaagattctgttcaggacttaaccttaaa
ggtgaagtacagtccagaggtgttgagatcctcaggcaggcttccgagaaagaacttacc
agtggccgtggaccaaccggtgttgcagcagcagcaatttacattgcatccatcctttgt
ggagagcgccgtacacagcgtgaggtcgcagatgttgcaggtgtgacagaagtcactatc
cgtaacaggtacaaagagcttgcagaagagcttgacatagagatcattctctaa
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