Methanolobus mangrovi: RE476_06460
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Entry
RE476_06460 CDS
T09569
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mmav
Methanolobus mangrovi
Brite
KEGG Orthology (KO) [BR:
mmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmav03016
]
RE476_06460 (endA)
Enzymes [BR:
mmav01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
RE476_06460 (endA)
Transfer RNA biogenesis [BR:
mmav03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
RE476_06460 (endA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
WMW21059
UniProt:
A0AA51UD99
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All DBs
Position
complement(1359574..1360632)
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AA seq
352 aa
AA seq
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MIGKLINDRVKAGKQAINELYNTGYYGRPKGDVLELTLIEAAYLLYKNRLEITMDEKALT
FQEFFTEASNRQQFFELKYIVYKDLRERGYYVQPSVTDFRVYPRGGHPGKTQAKMFVYVR
SERIPMPIKDLLSQYTAAVNVRKQMVLAIVDEESDLTYYEVKKADIKGSMDAILPEDEPV
PATMLEDRVLIWDEEASHLLYENGFYGKPLDNERLQLSLVESAYLLEQALIKIKDGTTGN
IPDLAEFSETASSIDPDFERKYSTYVDLRSRGFVPKTGFKFGTHFRVYNEVKSLNKLPHS
DYLVHAIPQDYEFFLPLMSRAVRLANSVRKQMLYSVEFASGIEYIDIGRIKM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
ttgattggaaaacttatcaacgatagggtaaaggccgggaaacaggctattaatgagctg
tataacaccgggtattacggacgtccaaagggcgatgttcttgaactcacacttatcgag
gcagcatatctgctttacaagaacaggcttgagattaccatggatgaaaaggcccttaca
tttcaggagtttttcacagaagcatctaacagacagcagttctttgagttgaagtacatt
gtttacaaagaccttcgagagaggggatactatgtccagccaagtgttacggatttccgg
gtatatcccaggggaggccatccgggcaagacccaggcaaagatgttcgtctatgtaagg
tctgagcgtatcccaatgcctattaaggaccttctttcacagtacactgctgcggtaaac
gttcgcaagcaaatggtgcttgccattgttgatgaagaaagtgaccttacttattatgaa
gtgaagaaagctgatatcaaagggagtatggatgcaatccttccagaggatgaacctgtt
cctgcaacgatgctggaagaccgtgtcctgatatgggatgaagaggcttcacatctgctt
tacgaaaatggtttttatggtaaacctcttgataatgagcgtctccagttatctcttgta
gaatctgcatacctgcttgagcaggctctcataaagattaaggatggcacaacgggcaat
attcctgaccttgccgaattctccgagacagcatcatccattgatcctgattttgaacgc
aagtacagcacgtatgttgaccttcgcagcaggggatttgttccaaagaccggttttaaa
tttggtactcatttcagggtctacaatgaagttaaatcactgaacaagcttcctcattcg
gattatctggtacatgcaattccgcaggactatgaattcttccttcccctgatgtcaagg
gcagtgagacttgccaacagtgtcaggaaacagatgttatattccgtcgaatttgcaagt
ggcatcgagtatatcgatatcggcagaataaagatgtaa
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