Methanolobus mangrovi: RE476_11275
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Entry
RE476_11275 CDS
T09569
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mmav
Methanolobus mangrovi
Pathway
mmav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
RE476_11275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmav03019
]
RE476_11275
03009 Ribosome biogenesis [BR:
mmav03009
]
RE476_11275
04131 Membrane trafficking [BR:
mmav04131
]
RE476_11275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmav04147
]
RE476_11275
Messenger RNA biogenesis [BR:
mmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
RE476_11275
Ribosome biogenesis [BR:
mmav03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
RE476_11275
Membrane trafficking [BR:
mmav04131
]
SNARE
SNARE associated proteins
Others
RE476_11275
Autophagy
Aggrephagy
Other aggrephagy associated proteins
RE476_11275
Exosome [BR:
mmav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RE476_11275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_2
AAA_14
AAA_22
TIP49
AAA_33
nSTAND3
AAA_28
IstB_IS21
AAA_7
AAA_25
Mg_chelatase
AAA_18
RNA_helicase
Sigma54_activat
AAA_17
Parvo_NS1
ABC_tran
Vps4_C
Zeta_toxin
AAA_19
DUF815
NPHP3_N
SLFN-g3_helicase
PhoH
ATP-synt_ab
AAA_24
AAA_3
ATPase
NB-ARC
AAA_30
ATPase_2
Sigma54_activ_2
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
WMW21938
UniProt:
A0AA51UFD0
LinkDB
All DBs
Position
complement(2331117..2333357)
Genome browser
AA seq
746 aa
AA seq
DB search
MDEVQIKVEKAHPNDFGRGIIRLDPTTLLSLQLSPGDIVEIEGKRKTAAKVWRAERQDWG
QGIARIDGFIRQNAGVGIGERITVRKAEVVTATKVILAPPEGVTMEYGDHISEIIKRNIM
KRPLVEGDIVPIISSMTQPMSSQMGGGQAIPLVAVETEPKEDEVLIVGEFTEIELRQKPV
RGYDGATRGTTYEDIGGLSTEIQRVREMIELPLKHPELFQRLNIEPPKGIILYGPPGTGK
TLIAKAVANESRANFLYIAGPEIMGKYYGESEERIRKIFEEAEDDAPSIVFIDEIDSIAP
KRENVTGEVERRVVAQLLTMMDGLEERGQVVIIGATNRLDAIDPALRRPGRFDREIEIGV
PDTDDRLEIMQIHTRGVPLADDVDEDFLDYIAKHTQAFVGADLLALVQEAAMRSLRRALP
DINLEDEDIPPEILETIMVCKDDFENALREIEPSAMREVLVEIPSVKWDDVGGLDKAKQE
MREAVEWPLTNPEKFVNMGIKPPKGVLLFGPPGTGKTLIAQAVANESNANFISVKGPQML
SKWVGESEKAIRETFKKARQVAPCIVFFDEIDSIAPMRSAASEDSKVSERIVNQLLTELD
GLEPLKEIVVIAATNRPDIIDPALIRSGRFDRMVLVGQSTFAGRKEIFKIHAKNIPMDDD
VTIDDLATITEGFVGADIEAVCREAVMLALRDNFEVQKVSMKYFREALNKVRPTLSENMV
EYYEKIQAQFKGGIRKEEASSYIGYR
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtacagataaaagtagagaaagcacacccaaatgattttggaaggggaatt
attcgtctggaccctactacactcttaagtctccaactctcacctggcgacattgttgag
atagaaggaaagagaaagactgcagccaaggtatggagagccgaaaggcaggactgggga
cagggaatcgccagaatagacggatttatcaggcagaacgcaggtgtcgggatcggagaa
agaattacggtaaggaaagccgaggtcgtaactgctactaaagtaattcttgcacctcct
gaaggagtcaccatggagtatggagaccacatcagcgagataatcaaacgtaatattatg
aaacgccctcttgtagaaggagacatagtacccattataagttcaatgacacagcccatg
tctagccagatgggcggcggacaggcaataccgcttgtagccgttgagactgaaccaaaa
gaagatgaggtcctcatcgttggagaatttacagaaatagaacttcgccagaaacccgtg
cgtggttacgatggcgcaaccaggggcaccacatacgaagatattggcggtcttagcaca
gagatacagcgcgtaagggaaatgatagaactcccattaaagcaccctgaactcttccag
aggcttaatattgaaccacctaaaggtatcatactttacggacctcccggaaccggaaag
acattaattgccaaagctgttgcaaatgagtcacgagcaaatttcctttacatagccggc
ccggagataatgggcaaatattacggagaaagtgaagagcgtatccgtaaaatattcgaa
gaagctgaggatgatgccccatccatagtatttatcgatgagatcgactccattgcacca
aagagagagaacgttacaggcgaggttgagcgcagggttgtagcccagttgctcacaatg
atggacggccttgaggaaagaggacaggtcgttataataggtgctaccaatcgcctggat
gcaattgatccggcacttcgaaggcccggaagatttgacagggaaatagagattggtgtt
cctgatacagatgaccgtctggaaataatgcagatccataccagaggcgtcccgcttgct
gatgatgtcgatgaagattttttagattacattgcaaaacacacacaggcatttgttggt
gcggatctcctggcccttgtacaggaagctgcaatgcgttcattgagacgtgccttacca
gatatcaatcttgaagacgaagacatacccccagagatacttgagaccattatggtatgc
aaggacgactttgagaatgcactcagggaaatagaaccttccgcaatgagagaagtcctc
gtagaaatcccctccgtaaaatgggatgacgtaggagggcttgacaaggctaaacaggaa
atgagggaagctgtggaatggccgcttaccaaccctgaaaaattcgtgaacatgggaata
aaacctccaaagggggttttattgtttggcccgccaggtaccggaaaaacacttattgca
caagctgtcgcaaatgagtctaatgcaaatttcattagtgtgaaaggaccgcaaatgctc
tccaaatgggtaggagaatccgaaaaagccatcagggagacattcaagaaagcaagacag
gtggccccatgcatagtattctttgatgaaatagattccattgcaccaatgagaagtgca
gcctctgaggactctaaagtatccgaaagaattgtgaaccaactgttgacagagctcgac
ggtcttgagccgttaaaagaaatagtagtcattgctgcaactaaccgcccagatattata
gacccggcactcatcagatcaggacgatttgacagaatggtacttgtagggcaatctaca
tttgcaggcagaaaagaaatcttcaaaatacacgccaagaacatacctatggatgatgat
gtcacaattgatgaccttgcaaccatcacggaaggcttcgtcggagcagacattgaagca
gtttgcagggaagcggtcatgctggcactgagagacaactttgaagtgcaaaaggttagt
atgaaatacttcagggaagctcttaacaaggtcaggccaacactatccgagaatatggtg
gaatattatgagaaaatacaggcacagttcaagggcggcataaggaaagaagaagcaagt
tcttatataggatacagataa
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