Megasphaera massiliensis: LCQ47_00120
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Entry
LCQ47_00120 CDS
T07781
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mmax
Megasphaera massiliensis
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmax03016
]
LCQ47_00120 (truB)
Enzymes [BR:
mmax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LCQ47_00120 (truB)
Transfer RNA biogenesis [BR:
mmax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCQ47_00120 (truB)
Prokaryotic type
LCQ47_00120 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UBS53622
LinkDB
All DBs
Position
21736..22617
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AA seq
293 aa
AA seq
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MIHGIINVLKPTGMSSHDVIGCLRRIYGMKKMGHAGTLDPLAAGVLPVYAGQATRLIEYG
DSDVKSYHAEFVLGLATDTEDSTGTVVERLPVPNLSEADVCRVLASFCGDIDQAPSKYSA
INVNGVKAYKLARQDRDFTLPVRQVTIHSLELLSFDGRRGTFAVTCSKGTYVRSLIRDLG
TALGTCACMTYLVRTRAGLFTIEEAATLEMLEQDPASYVLPADMAIHDIRRANCSTKQCD
FLLQGRPVPFAGPNLTDGDVLRVYGPDGRLMGIVRYDEQHHILRPHKMFADGL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatacatggaatcattaatgtactgaagccgacggggatgtcgagtcacgacgtcatc
ggctgcctgcggcgcatttacggcatgaagaagatgggccacgccggtaccctcgacccc
ttggcggccggtgtcctgccggtctatgccgggcaggcgacgcgcctcatcgaatacggc
gacagcgacgtcaagtcataccatgccgaattcgtcctggggctggcaaccgataccgaa
gacagtacggggacggtcgtcgaacggctgccggttccgaatctttccgaagcagatgtc
tgccgcgtcctggcctctttctgcggcgatatcgatcaagcgccgtcgaagtattcggcc
atcaacgtcaacggcgtcaaggcctataaattggcccgccaggaccgggatttcaccttg
cctgtgcggcaggtgacaatccacagtctggaacttctgtccttcgacggccggcgcggt
acctttgccgtaacctgctctaagggaacctatgtccgatccctcatccgcgatttgggg
acggcccttgggacctgtgcctgcatgacctatctcgtccgaacccgggccggtctgttt
accattgaagaagcagcgaccttggagatgttggaacaagatccagcatcttatgtcctt
ccggccgacatggccattcacgatataaggcgggccaactgctcgaccaagcagtgtgat
tttctccttcaggggcggcctgtgccctttgccgggccgaacctcaccgatggagacgtg
ctgcgcgtctatggccctgacgggcgattgatgggcatcgtccgctacgatgaacagcac
catatcctgcgtccccataagatgtttgcagacggattgtga
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