Megasphaera massiliensis: LCQ47_00140
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Entry
LCQ47_00140 CDS
T07781
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCQ47_00140 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmax03019
]
LCQ47_00140 (recQ)
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_00140 (recQ)
Enzymes [BR:
mmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCQ47_00140 (recQ)
Messenger RNA biogenesis [BR:
mmax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCQ47_00140 (recQ)
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCQ47_00140 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UBS53626
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All DBs
Position
26472..28295
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AA seq
607 aa
AA seq
DB search
MLQIESLLKQYFGYSSFRPGQHEVIQTLLDGRDCLAIMPTGAGKSICFQLPALMMPGVTL
VISPLISLMKDQVDSLVNQEIPATYINSQCTFEEVKARFAAIRAGRIKLVYISPERLENQ
FFTAFMQTLPISMFIIDEAHCVSQWGHDFRPSYCAVRDWIAALPKRPVVGAFTATATEKV
KHDMMSLLGLQKERIFIGGFDRPNLYFRVVHAKGKMEFTLSYIAKHREDSGIIYAATRKE
VDRICDELNRRGIKAGRYHAGLSDDMRRSMQEAFTYDKIQVIVATNAFGMGIDKSNVRYV
IHYQMPKNIESYYQEAGRAGRDGAPGDCILLFNRQDIMIQKFLIEQSTRDAKQQDTEFRL
LNAMVRYCEGNHCLRHYILSYFGEHPSWEHCDKCGNCDQETVEEDMTEQVRSICLCVDEL
KGRFGLTMVADILKGSQNAKIRRYGFDRNAVFGMLGNFSLPEVRDMVRQCIDDGYLEQSD
GKYPVVSLTADGRQAMGGHKRIVQQKRVVEEIPAAIPKRRQKRSAGTFDEEALRPLFDTL
RAVRRDLAKDENIPPFVIFSDATLWDMAALKPSSLDAMGDIKGVGSFKLHKYGRSFVSAI
QSYMNNQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaattgaatcattattaaaacagtattttggctattcgtcattccgaccgggc
cagcacgaagtcattcagaccttgcttgacggccgcgattgcctggcaatcatgccgaca
ggggcggggaagtcgatctgcttccagcttccggccctgatgatgcccggcgtgacctta
gtcatttcaccgctcatttccctgatgaaagaccaggtagacagtctggtcaatcaggaa
ataccggcgacatatatcaacagccagtgtacctttgaagaggtgaaggcccgctttgcc
gccatccgtgccggccgcatcaagctggtctatatctcgccggaaagactggagaatcag
ttctttacggcttttatgcagacactgcccatttccatgttcatcatcgacgaggcccac
tgcgtctctcaatggggacacgatttccggcccagttactgcgccgtccgcgactggatc
gcagcccttcccaagcggcctgtcgtcggggcttttacggcgacggcgacggaaaaggtc
aagcacgacatgatgtccctcttgggccttcaaaaggaacgcatttttatcggcggcttc
gaccggcccaacctctatttccgcgtcgtccacgccaagggcaagatggagtttaccctg
tcttatattgccaaacatcgtgaagacagcggcatcatctacgcggcgacgcgaaaagaa
gtcgaccgtatttgcgatgaactgaatcggcggggcatcaaggccggccgttaccacgcc
ggtctcagcgacgatatgcgccgttccatgcaggaggcctttacctacgataagatccag
gtcatcgtagcgaccaacgccttcggcatgggcatcgacaagagcaatgtccgctacgtc
atccattaccagatgccgaaaaacatcgaaagttactaccaggaagccggcagagccggc
cgcgacggggcaccgggggactgtatcctcctctttaaccgccaggatatcatgattcag
aaattcctcatcgagcaatcgactcgcgatgcaaagcagcaggacacggaattccgcctg
ctgaacgctatggttcgctactgtgaaggaaaccactgcctgcgccattacatcctgtcg
tattttggtgagcatccgtcgtgggagcactgcgataaatgcggtaactgtgaccaggaa
acggtagaagaggacatgaccgaacaggtgcgcagcatctgcctctgtgtcgatgaattg
aaagggcgcttcggcctgaccatggtggccgacatcctgaaagggagtcagaatgctaag
attcgccgctatggctttgaccgcaatgccgtctttggcatgctcggtaatttttctctg
cccgaagttcgcgatatggtgcgccagtgcatcgacgacggctatctcgagcagtctgac
ggaaagtatcccgtcgtctccctgacggcagacggaaggcaggcgatggggggccataaa
cgcatcgttcagcagaaacgcgtcgtcgaagagattccggcggccattcccaaacgccgg
caaaaacgcagtgccgggacctttgacgaagaggccctgcgccccttgttcgacaccctg
cgggctgttcgccgcgacttagccaaggacgaaaacatcccgcccttcgtcattttttcc
gatgccaccttgtgggatatggcagcccttaagccgagcagcctcgacgccatgggtgac
atcaagggcgtcggcagttttaaactgcataaatatggccgcagcttcgtcagcgccatt
cagtcttatatgaataatcagtaa
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