Megasphaera massiliensis: LCQ47_00760
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Entry
LCQ47_00760 CDS
T07781
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmax
Megasphaera massiliensis
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmax03032
]
LCQ47_00760 (topA)
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_00760 (topA)
Enzymes [BR:
mmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LCQ47_00760 (topA)
DNA replication proteins [BR:
mmax03032
]
Prokaryotic type
DNA Topoisomerases
LCQ47_00760 (topA)
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCQ47_00760 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Phage_zn_bind
Motif
Other DBs
NCBI-ProteinID:
UBS53743
LinkDB
All DBs
Position
178344..180611
Genome browser
AA seq
755 aa
AA seq
DB search
MLEFPIKRTIIIDDSKKKKGRKKKGDGEKTVIRGTVNLPKKEPLKKLDKLPKNAKNLVIV
ESPAKAKTIERFLGSGYKVMASRGHLRDLPRNQFGVNIEEGFVPTYTNMWDKRKLIDDLQ
EEYVRSKKVFLATDPDREGEAISWHLAHLLDIDPKDKCRIMFHEITKKAILEAIKKPEAI
DIKKVDAQQARRILDRIVGYKLSPLLWKKVCKGLSAGRVQSVAVRLICEREEAIKAFVPE
EYWTVSGTYQTEDGLTLPTELTKIDGKKAEIQHEDEAKTIAHDLSWESRGETQDPDKIVK
VEKRKRKRQPQPPFTTSTMQQECVGKLNFGAKKTMMLAQQLYEGLDMGDQGHVGLITYMR
TDSVRINDDMVQAARDFITANYGAEYVPEKPRTYKTKQSSQDAHEAIRPTSLELTPYKVS
DFLSRDQLRLYTLIWNRFLASQMESVETEHMAIVIESGKYELRAAGYKVLFKGFTELYED
AKKDKTLAELPHISANTVVHNKAVTPQQHFTQPPARYTEASLIKTLEEKGIGRPSTYAPI
MDTIQNRNYVEKKDKQFIPTELGVIIVDLLKKYFARIINVSFTAHMEESLDAIEQGDDTY
PHVLQEFYDIFKPEMDEAETKMEKVTISGQESGQICEVCGSPMVYKFGRFGKFLACSNFP
ECRNTKAIVEDLGITCPKCGKGTLIKRKSKRGRVFYGCSQYPDCDFVLWNQPVDKKCDLC
GSIMIVKHYKKGPDKLFCSNGDCENHKKGEVVNEE
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgttagaatttcccattaaacgcacgattatcatagacgattcaaaaaagaagaagggc
cgtaaaaagaagggtgacggtgaaaagacggtcatccgcggtacggtcaatcttcccaag
aaagaacctctgaagaagctcgacaagcttcctaagaatgctaagaacctggtcatcgtc
gaatcgccggcgaaagccaagaccatcgaacggttcctcggcagcggctataaggtcatg
gccagccgcggtcatcttcgcgacttgccgcgcaaccagttcggcgtcaacatcgaagaa
ggtttcgtgccgacctataccaatatgtgggataagcgcaaactcatcgacgacttgcag
gaagaatacgtccggtcgaaaaaagtctttctggcaactgacccggaccgcgaaggcgaa
gccatttcctggcatttggcccatttgctggacatcgatcccaaggacaaatgccgcatc
atgttccacgaaatcacgaaaaaagcgattctcgaagccatcaagaagccggaagccatc
gacatcaaaaaggtcgacgcccagcaggcccgccgcatcttggaccgcatcgtgggctat
aaattaagcccgctgctctggaaaaaggtctgtaagggcctcagtgccggccgcgttcag
tccgttgccgtccgtttaatctgcgaacgagaagaggccatcaaagccttcgttcctgaa
gaatattggaccgtcagcgggacgtatcagacggaagacggcttgacccttccgacggag
ctgacgaaaatcgacggcaagaaggctgaaatccagcatgaagacgaggccaagaccatt
gctcacgacctcagttgggaaagccgcggtgaaacgcaggaccccgataagattgtaaaa
gtcgaaaaacgcaagcgtaaacgtcagcctcaaccgccgtttacgacgtcgacgatgcag
caggaatgcgtcggcaagctcaatttcggcgccaagaagacgatgatgctggcccagcag
ctctatgaaggcctcgatatgggcgaccagggccacgtcggcctcatcacctacatgcgt
accgactcggtccgtatcaacgacgacatggtccaggcggcgcgggatttcattacggcc
aactacggtgccgaatacgtccctgaaaagccgcggacctataagaccaagcagtcgagt
caggatgcccacgaagccattcgcccgacgtcattggaattgacgccttataaggtttcc
gacttcctgtcgcgggaccaattgcgcctctacactttgatttggaaccgctttttggcc
agccaaatggaatcggtcgaaacggaacacatggccattgtcattgaaagcggcaagtac
gaactgcgggccgccggctacaaggtcctcttcaaaggctttacggagctctatgaagat
gccaagaaggataagaccttggccgaactgccccatatttcagccaataccgtcgtccat
aacaaggccgtaacgccgcagcagcactttacccagccgccggcacgctacaccgaagcc
agcctgattaagactctcgaagaaaagggcatcggccggccgagtacgtacgcgcccatt
atggatacgatccaaaaccgcaattacgtcgaaaagaaggataagcagttcatcccgacg
gagctcggcgtcatcatcgtcgacctcctcaagaaatactttgcccgcatcatcaacgtc
agctttacggcccatatggaagaatccctcgacgccatcgaacaaggcgacgatacgtat
ccccacgtcctgcaggaattttatgacatcttcaagcctgaaatggacgaggccgaaacg
aagatggaaaaggtcaccatttccggacaggaatcgggccagatctgcgaagtctgcggg
tcgcccatggtctataaattcggacgcttcggcaaattcctggcctgctccaatttcccg
gaatgccgcaacaccaaggccatcgtcgaagatttgggcattacctgcccgaaatgcggc
aaggggacgctcatcaagcgcaaatcgaaacgaggccgcgtcttttacggctgcagccag
tatccggactgcgacttcgtcctctggaaccagcctgtcgacaagaaatgtgacttgtgc
ggcagcatcatgattgtcaaacattataaaaaaggccccgacaagctcttttgcagcaac
ggggactgtgaaaaccataaaaaaggtgaggtagtgaatgaagaatag
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