Megasphaera massiliensis: LCQ47_02460
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Entry
LCQ47_02460 CDS
T07781
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax03420
Nucleotide excision repair
mmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCQ47_02460
03430 Mismatch repair
LCQ47_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_02460
Enzymes [BR:
mmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCQ47_02460
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCQ47_02460
MMR (mismatch excision repair)
Other MMR factors
LCQ47_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Rv2179c-like
AAA_11
ResIII
AAA_12
DEAD
AAA_16
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
UBS54064
LinkDB
All DBs
Position
540793..543324
Genome browser
AA seq
843 aa
AA seq
DB search
MNLNAEQQQVVHELSESILLNAPAGTGKTRVLAARVANILAQKKAEGSEILCLTFTNRAC
KELKNRIIDTVPEEGFAVTVKTIHSFCYSLIKEETKRQSDRYHDFLIYDDEDCKQLIASI
DLTRTTPRPALQELQTFIEFEKKKRVIPGLRDFTNIQDDLKGWLTDYGEDLVWEYDIALA
ENHAIDFTDLITGAYEFLQDDAICLRWRERYRFISVDEMQDTSEVEYTVISHLFPGRNIL
LCGDYFQTIYEWRGSYPQYIWQEFRNDYQPLEVTFTINYRATQLLLEASQSFLFRTLGKV
TVQSIYTEPGISASKDRGAPIVLHKAGTVFEEARWIFREVKALPPEERLKTCILVRDNRQ
AKLIWMGITSHNQKYPQDQQLPVTCIDQFHLFKRQECKDVLAYLRLVLNKHDNLSLKRIV
QRFVPRIGRRTLDPIESDSYRKVGLMLSDFIDPLSHHTGDPYGLLLTALAEERLVVFDVE
STGTDTTQDEIIQIAAIRLDAKGQTIDKFNTYVKSGRAVGTSYYVHHISDEKLAAEGIPP
KEALTKFLAFAKDAVIVGHNVTYDLSILQSELQRLGISESADFPYYDTLDIYRRFYPTLL
NHKLETLSRLFPSGHKPTHDAFDDILATAGLLIHAINEKIRPTETTRRAAMAIYLPLFAP
FSRKMDALRRLSYQARPTKIITSVMKDNGVKAWYQTHRDTSDRANYIDRLENIRKLYRIA
KETDDSGQNPRDALTEFLKMTALSNSELDSMLAKDPKIPIITIHQAKGLEFDYVFMASLE
DHVFPTYWARQKGDIEEEKRLFYVAMTRAKKRLYLSWHQGFGRQSYLPSRFLKGVNWDYC
EIR
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaacgctgagcagcagcaagtcgtccatgagctgtcagagtctattttactc
aatgccccggccggaaccggaaagacccgggtcctggcagcaagggtagccaatatctta
gcccaaaagaaggccgaaggctcggaaatcttatgcctgacctttaccaaccgggcctgc
aaggaactgaaaaaccgcatcatcgacacggtaccggaagaaggctttgccgtcacggta
aagaccatccacagtttctgctacagcctcatcaaagaagagacgaaacggcagagcgac
cgctaccatgatttcctgatctatgacgacgaagactgtaagcagctcatcgcttccata
gaccttacgcggacgacaccgcgtccggcattacaggaacttcagaccttcatcgaattt
gaaaaaaagaaacgcgtcatccccggcctgcgcgatttcaccaatattcaggatgacctc
aaagggtggctcacggactacggcgaagaccttgtttgggaatatgatatcgcccttgcc
gaaaaccacgccatcgattttaccgacctcattaccggggcctatgaatttctccaagac
gatgccatctgcctccgctggcgagaacggtaccgctttatctcggtcgacgaaatgcag
gatacgagtgaagtcgaatataccgtcatcagccacctctttccgggccgcaacatcctc
ctctgcggagattactttcaaaccatttacgaatggcgcggatcctatccccaatacatt
tggcaagagtttagaaacgactatcagcctctggaagttaccttcaccatcaattaccgg
gccactcagctcttgctggaagcctctcagtccttcttattccgcaccttggggaaagtg
accgtccagagcatctataccgagccgggcatctcggcctcaaaggatcgcggcgccccc
atcgtcctccataaagccggcaccgtgtttgaggaagcccgctggattttccgcgaggtc
aaagcccttcctccggaagaacgcctgaagacctgcatcctcgtccgcgacaatcgccag
gctaagctaatctggatgggcattacatcgcataaccaaaagtacccgcaagaccagcag
ctgccggtcacctgcatcgaccaattccacctgtttaaacgacaggaatgcaaagacgtc
ctggcttatctgcgcctcgtgctcaataaacacgacaacctcagcctgaagcgaatcgtc
caacgcttcgtcccccgcatcggccggcgtaccttggatcccatcgagagtgattcctat
cgaaaggtcggcctcatgctcagcgacttcatcgatcccttgtcccatcacacgggagat
ccttacggactgttactgacggcactcgccgaagagcgactggtcgtattcgacgtcgaa
agcacaggcaccgacacgacacaggatgaaatcatccagattgccgccatccgcctcgat
gcgaaaggacagaccatcgataagttcaacacttatgtaaaatccggacgagccgtcggc
acgtcatactacgtccatcacatcagcgatgaaaaactggccgccgaaggaattcctccc
aaagaagccctgacaaagttcttggcctttgccaaagatgccgtcatcgtcggccacaac
gtcacctatgacttgtccatcctccaaagcgaactgcagcgcctcggcatttccgaaagt
gccgactttccctactacgataccctcgacatctaccgccgattttacccgaccttgctc
aaccataagctagagactttgagccgcctcttccccagcggccacaagccgacgcacgac
gcctttgacgatattttggctacagccgggctcctgatccatgccataaacgaaaagatt
cgcccgacggaaacaacccgccgggccgctatggccatctatctccccctctttgccccc
ttcagtcgaaaaatggacgctttgcggcgcttgtcttatcaagcacggcccacgaaaatt
attacgtccgtcatgaaggacaacggcgtcaaagcctggtatcaaacacatcgtgatacc
tccgacagggccaactacatcgatcggttggaaaacatccgtaagctctaccgtatcgcc
aaagaaacggacgattccggacagaatccgcgcgatgccctgaccgaatttctcaagatg
acggccctttcgaacagcgagctcgacagcatgctggccaaggacccgaaaataccgatt
atcaccattcaccaagccaaaggccttgaattcgactacgtctttatggccagtttagaa
gaccatgtcttcccgacttattgggctcgtcaaaaaggagatatcgaagaagaaaaacgc
ctcttttatgtcgccatgacgcgagcaaaaaagaggctgtatctcagctggcaccaagga
ttcggccgtcagagctatctgccgagccgcttcttgaaaggtgtcaattgggattattgc
gaaatcagataa
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