Megasphaera massiliensis: LCQ47_02875
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Entry
LCQ47_02875 CDS
T07781
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax00521
Streptomycin biosynthesis
mmax00523
Polyketide sugar unit biosynthesis
mmax00525
Acarbose and validamycin biosynthesis
mmax00541
Biosynthesis of various nucleotide sugars
mmax01100
Metabolic pathways
mmax01110
Biosynthesis of secondary metabolites
mmax01250
Biosynthesis of nucleotide sugars
Module
mmax_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCQ47_02875 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCQ47_02875 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LCQ47_02875 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCQ47_02875 (rfbB)
00525 Acarbose and validamycin biosynthesis
LCQ47_02875 (rfbB)
Enzymes [BR:
mmax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LCQ47_02875 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
NifZ
KR
Motif
Other DBs
NCBI-ProteinID:
UBS54145
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All DBs
Position
complement(625836..626858)
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AA seq
340 aa
AA seq
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MNIIVTGGAGFIGSNFVFYMLKTHPEDRIICLDKLTYAGNLSTLQPVMDQPNFRFVKADI
CDRKAVYQLFEEEKPDMVVNFAAESHVDRSIENPSIFLETNIMGTAVLMDACRKYGIKRY
HQVSTDEVYGDLPLDRPDLFFTETTPIHTSSPYSSSKASADLLVLAYHRTYGLPVTVSRC
SNNYGPYHFPEKLIPLMIINALNDKALPVYGDGLNVRDWLYVEDHCRAIDLILRKGRVGE
VYNVGGHNEMKNIDIVTLICRELGKDESLIQHVTDRKGHDRRYAIDPTKIHDELGWLPET
KFADGIKKTIAWYLENKDWWQPIVSGEYQTYYQEMYGHRG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatcgtcaccggcggtgctggatttattggctctaattttgtcttttatatg
ttaaaaacacatcctgaagatcggattatttgcttggataaattgacctatgccggcaac
ttgtcgacgctgcagccggtcatggatcagccgaattttcgcttcgtaaaagccgatatt
tgtgaccgaaaagctgtctatcagctctttgaagaagagaaaccggacatggtcgtcaac
tttgccgcagaatcccatgtcgaccgctctattgaaaatccttcgattttcttagaaacg
aatatcatggggacggcggttctcatggatgcctgccgcaagtacggcatcaagcgttat
caccaggtatcgacggacgaagtctacggtgatttgcccttagatcgtccggacttgttc
tttacggaaacgacacccattcacacgtcgagtccgtacagctcgtcgaaggcttcggcc
gatttgttggttctggcttatcatcggacgtatggacttccggtgacggtgagccgctgc
tctaataactacggaccctatcattttccggaaaaattgattcccctcatgatcatcaac
gctttgaacgacaaggctcttccggtctacggtgacggcctcaacgtccgtgactggctc
tacgttgaagatcactgccgggctatcgacctcatccttcgcaagggccgtgtcggcgaa
gtctataacgtcggcggccacaatgaaatgaagaacatcgacatcgttaccttgatctgc
agggaactggggaaggacgaaagtctgattcagcatgtgaccgaccgcaaaggtcacgac
cgccgctacgccatcgacccgacaaagattcatgacgaactgggctggcttccggaaacg
aagtttgccgacggtatcaaaaagaccatcgcctggtacctggaaaacaaagattggtgg
cagcctatcgtctccggtgaatatcagacctattatcaagagatgtacggccatcgcggt
taa
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