Megasphaera massiliensis: LCQ47_03240
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Entry
LCQ47_03240 CDS
T07781
Name
(GenBank) S-layer homology domain-containing protein
KO
K21449
trimeric autotransporter adhesin
Organism
mmax
Megasphaera massiliensis
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mmax02000
]
LCQ47_03240
Transporters [BR:
mmax02000
]
Other transporters
Pores ion channels [TC:
1
]
LCQ47_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
SLH
YadA_anchor
Collagen
Fpg-like_C
DUF3294
TagH_SH3-like
Motif
Other DBs
NCBI-ProteinID:
UBS54215
LinkDB
All DBs
Position
complement(699063..704603)
Genome browser
AA seq
1846 aa
AA seq
DB search
MSDGQKYAGDNAKEDGTNVIAKKLNEQLDIVGGAEGELTDKNIGVNNVNGQLKVQLAKNI
DLGEKGSVTTGATVINNDGVTITPSTGNPVTLTGTGLNNGGNKITNVASGSDGVDADGNP
TYNTTTNAANIGDLKNVNDALVNKGMDFTADSGDTVHRDLGEALGIVGDGQNITTTTDPT
NGNITVALSNDISIGKAGTDGVDGKIGVNGKDGSSVVINGADGSIGLTGPAGEDGTQTTV
TIAAGNSVNNVDGTPVDRITAGGQTIATMSDGQKYAGDNAKEDGTNVIAKKLNEQLDIVG
GADADKLTENNIGVNNVNGQLKVQLAQNIDLGKDGSVTMGNTVVNNSGLTIANGPSVTSS
GINAGESKITNVADGDVSATSTDAVNGSQLKAVQDIAEKHTKVTVEGGTEAGTTDYAGNN
LQLKATTVDGQTTYDLKLADNLSIGTKGADGKDGVDGSIGVNGKDGSSVVINGTDGISVK
GADGKDGVTITGKDGVDGVDGAEGHIGLNGKDGMTDIYTTPGQPGVNGQDGDTMTRIIYT
DPNEANHEVATLDDGMKYTGDTGSAAVALNKTVNIVGGETDSTKLSTDNNIGIVAEQADD
NAKLTVRLAKDITGLNTVTAGEATIGNQSILTAGGVEQDGSYVTGLDNTSWNVTNPDIVS
GRAATEDQLKIVTDTVNALADGTSENATGGFGLTDDSGTAVKQDIGKTIQIAGDGNITTT
ADATSGKLTVGLSNTIALGEKASEDGTTEGADSSITVNGKDGSSVAINGADGTIALNTAD
GSPVTIAAGTQVNNLAGTPIDRITIGSATVATLDDGMKYYGDFGDVASVKLNNQVNVKGE
ANSKDDLTTGNIGVVSAQDGDNALLTVKLNKDINLGSTGSVTTGNTVINNSGVTITPTGG
NPVTLTDAGLNNGDNKITNVAPGAINEDSMDAVNGSQLNEIRKLAGQHTYVTVEGGTEGE
AAEYAGKNLLLQTRRDNNLTTYYDLKLSDNITLGSANDSEGTGGVDSSITLNGAAGSSVA
INGGDGSIALTGANGSTATIAAGTSTPNLAGTAIDRITAGGSTVATLDDGMKYGGDFGDT
SKVKLNNQVNVKGNAKNEADLTDGNIGVVSIQDGDNGQLLIKLNKDLNLGDTGSVTMGNT
VINNSGVTIGSGTSAVTLTDKGLNNGGNQITNVASGTTGKTYDTSVDGQENYNNAANIGD
LTTAINDVKNADNGGGFGLTADDGKSVKQDLGSTITVTGDNNIETKVTDDGKLQVGLKDN
VDLGQNGSITAGNTTIDKGGVSTDKIAIKDSGISIDKDGINAGNKQIKDVGSGLGNTYDT
SVAGQENYNNGANIGDVYNIAKGQADAVKAQSGKNITVGDDNKVNLNDNITLGDTTDPSK
QVNIDGNGATVTAGSGDNQVKLDGSKGQISAGGAVLGNQENTANDGNPATGNYLTGLDNT
KWDSNNIQSGRAATEDQLKVVDDKVNKGRVFQGDDGADNSVTVGLGDTLKLNGGADTSKL
SSGNIGVVRNSSGDGLDIKLAKDLKDLDSVTTGNTTINDSGVTIKTVDSDRTITIQDSNV
NMGNNVVSGVADGTVAPGSTEAINGGQLALRDQAINSLGGEVNKLDNRINRVGAGAAALA
ALHPQDFDPDDKWDFAFGYGHYRGANAGAFGAFYKPNEDTTFSVGGTIGGGENMINAGVS
FKLGQGNNVSNSRVGMAKEIKHLRDDVAKLEDIVNRQSQMINQLTGQNPGTIESKGSELF
PDVPANHWAYEYVTKLHQLGIIEGYPDGNFDGNRMMTRYEFAAVVYRAIMAGAASNAALQ
GDDTLDRLANEFSAELKYIRIDTIAKDKDGKPTIQRVRIVPENKQN
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacggtcagaagtatgccggcgataatgctaaggaagatggcacgaatgtcatc
gctaagaaactcaacgaacagttggatatcgttggcggtgctgaaggcgaactgacggac
aaaaacattggcgttaataacgtcaatggccagttgaaagtccagttggctaaaaatatc
gacttaggtgaaaagggctccgttacaacaggtgctacggttatcaataacgatggcgtg
accattacgccttctacgggtaaccctgtaaccttgacgggtaccggcctcaataacggc
ggcaataagattactaacgtggccagcggctctgatggggtcgatgctgacggtaacccg
acgtacaatacaacgactaatgcggctaacatcggtgaccttaagaatgtgaacgatgcc
ttggttaataagggcatggacttcacggccgatagtggggacacggtacatcgtgacctg
ggtgaagctttgggcatcgtaggtgatggtcagaatattacaaccacgactgatcctaca
aacggtaatatcacggtagccttgagcaacgatatctccatcggcaaagcaggaacagac
ggtgtcgacggcaagattggcgtcaacggtaaagacggctcgtccgtcgttatcaacggc
gctgacggctccattggattgaccggccctgccggtgaagacggaacgcagaccacggtt
actattgcagccggtaacagcgttaataacgtagacggtactcctgttgatcgtattact
gcaggcggccagaccatcgctactatgagtgacggtcagaagtatgccggcgataatgct
aaggaagatggcacgaatgtcatcgctaagaaactcaacgaacagttggatatcgttggc
ggtgctgatgccgacaaattgacggaaaataacattggcgtcaataacgtcaatggtcag
ttgaaagttcagttggcacaaaacatcgacctgggtaaagacggttctgtaactatgggt
aacaccgtagttaataatagcggtttgacgatcgccaatggaccatcagtaacttccagt
ggtatcaatgcaggcgaaagcaagattactaacgttgcagacggtgatgtaagcgcgacc
tctactgatgccgttaacggcagtcagttgaaggccgttcaagacatcgctgaaaaacac
acgaaggttaccgtcgaaggcggaacagaagccggtacgactgactatgcaggcaacaac
ttgcaacttaaagcaaccactgttgacggccagacgacgtatgacctcaaacttgctgac
aatctctctatcggtacgaaaggcgctgacggcaaagatggtgtggacggttcgattggc
gtcaacggtaaagacggctcgtccgtcgttatcaacggtacggacggtatttccgtcaaa
ggtgctgacggcaaagatggtgtcaccattaccggtaaagacggtgtcgatggcgtcgac
ggcgccgaaggccacatcggcctcaatggcaaagacggcatgaccgacatctataccact
ccgggacaacctggcgtcaatggccaagatggcgacaccatgacccgtatcatctacacc
gacccgaatgaggcaaatcatgaagtggccaccctcgatgacggcatgaagtacaccggt
gataccggttcggcagctgttgccttaaataaaacggtcaacattgtcggcggagaaacg
gattctacgaagttatctaccgacaacaacatcggcatcgtcgctgaacaagccgatgac
aatgccaaactgacggttcgcctggcgaaagacattaccggtttgaatacggtaacggcc
ggcgaggccaccattggcaatcaatcaatactcacagccggtggtgttgaacaagacggc
agttatgtaaccggtttggataacacaagctggaatgtgaccaatccggatattgtaagc
ggtcgtgcagcgacggaagatcagctgaagatcgtaaccgatacggtgaatgctcttgct
gacggtaccagtgaaaacgcaacgggcggcttcggcttgaccgacgatagcggcaccgct
gttaagcaagacattggcaagacgattcagattgccggcgatggcaacatcacgactacg
gctgatgcgaccagtggcaaactcaccgtaggattgagcaatacgattgcccttggtgaa
aaagccagtgaagacggtaccactgaaggtgcggacagctccattaccgtgaacggtaaa
gacggatcttccgttgctatcaacggtgctgacggaactatcgccttgaacaccgctgac
ggttcacctgtaactatcgcagcaggtactcaggttaataacttagccggaacgcccatt
gaccgcattactatcggtagtgcaaccgttgctactcttgatgacggcatgaaatattac
ggcgatttcggagacgttgcgtctgttaagttgaataatcaagttaacgtaaaaggcgaa
gcaaactctaaagatgacctgacgacgggcaacattggcgtcgtatccgctcaggacggc
gacaatgcgttgttaacggttaagctcaataaagacatcaacttaggctcaaccggttcc
gtaactacaggcaacaccgtgatcaataacagtggtgttaccattacgcctaccggcggt
aatcctgtaaccttgacggatgccggcctcaacaacggcgacaataagattaccaatgtt
gcaccgggagccatcaatgaagactctatggatgctgtcaatggcagccagttaaatgaa
attagaaaattagctggtcaacatacttatgtaaccgttgaaggtggtacagaaggcgaa
gcggccgagtatgcaggtaagaacttgttgcttcaaacaagaagagataataacctgaca
acgtattatgacctcaaactctctgataacatcaccttaggtagtgccaacgattctgag
ggcacaggcggtgtagacagctcgattaccctgaacggtgctgccggatcttccgtcgct
atcaacggtggtgatggatctatcgccttgaccggtgctaacggttccactgcgactatt
gcagccggaacaagcactcctaacttggccggtacggccattgaccgcattaccgcaggc
ggctcgaccgttgcaaccctcgatgacggcatgaagtatggcggtgacttcggcgatacc
tctaaggttaagctgaacaaccaggttaacgtcaaaggcaatgctaagaatgaagccgac
ctcaccgatggcaacatcggcgtcgtatccatccaggatggcgataatggccagctcctc
attaagctcaataaagacctgaacctcggtgataccggttccgtcaccatgggcaacacc
gtaatcaacaacagtggtgtgaccatcggcagcggtacgtcggcagtcaccttgactgat
aaaggcctcaacaacggcggcaaccagatcactaatgtggccagcggtacgaccggtaag
acttatgacacgtctgtagacggtcaggaaaactacaacaatgcagctaatatcggtgat
ttgacgacagctattaacgacgttaaaaacgctgacaatggcggcggcttcggcttaact
gctgatgacggtaagtctgtaaaacaagacctgggcagcacgattaccgtaaccggtgac
aacaacatcgaaacgaaagttaccgatgatggtaagctgcaggttggcttgaaagacaat
gttgacctcggtcaaaatggttccatcacagccggcaatacgaccatcgataaaggtggc
gtttccaccgacaagattgccattaaggattctggcatctccatcgataaagatggcatc
aatgccgggaataagcaaatcaaggacgtaggcagcggtcttggaaatacttatgacacg
tctgtagccggtcaggaaaactacaacaacggtgcgaatatcggtgacgtttacaacatt
gcgaaaggccaagccgacgcagtgaaggcgcaatccggtaagaacatcaccgtaggtgat
gataacaaggttaacctgaatgacaacatcactttgggtgataccaccgatccttcgaaa
caggtcaacatcgacggcaacggtgccaccgttacggccggcagcggcgacaaccaggta
aaactggatggctctaaaggccagatttccgcaggcggtgccgttctgggtaaccaggaa
aacacggcaaacgatggcaatccggcaacgggcaactacctcactgggttggacaacacc
aagtgggatagcaataacattcagtccggccgtgctgctaccgaagatcagctgaaagtc
gtagatgacaaggtcaacaagggccgtgttttccaaggcgacgatggtgcagacaacagc
gtcaccgttggcctcggcgatacgctgaaactcaacggcggtgccgatacgtctaaactg
tccagcggcaacatcggtgttgtaagaaacagcagcggtgacggcctcgacatcaaactg
gctaaggacttgaaagaccttgacagtgttacgacgggcaatacgacgattaatgatagc
ggtgtcaccatcaagaccgtagacagcgatcgtacgattaccattcaggacagcaatgtc
aacatgggcaacaacgtcgtaagcggtgtcgctgacggaaccgtagctccgggctcgacg
gaagccatcaatggcggccagctggccctgcgcgaccaggctatcaacagcttgggcggg
gaagtcaataaactggataaccgtatcaaccgcgtcggtgctggtgcagccgctctggca
gccctccatccgcaggacttcgatcctgatgataagtgggatttcgccttcggctatggc
cactatcgcggcgcgaatgccggtgctttcggtgccttctacaaaccgaacgaagataca
accttctcggtcggcggcaccatcggcggcggtgaaaacatgatcaatgccggtgtttcc
ttcaaattaggtcagggcaacaacgtatcgaattctcgcgttggcatggccaaggaaatc
aaacacctccgtgatgacgtagctaagctcgaagacatcgtcaatcgtcagagtcaaatg
atcaatcagttgaccggccagaatcctggtacgattgagtccaagggcagcgagctcttc
ccggatgttccggctaaccactgggcttacgaatacgttaccaagcttcatcagctcggc
attatcgaaggctatccggatggaaacttcgatggtaaccgcatgatgacccgttacgaa
ttcgctgcggttgtctatcgtgccatcatggcaggcgctgcctcgaatgcggccctccag
ggcgacgatacgttggatcgcttggccaacgaattctctgcagaactcaagtacatccgc
atcgatacgatcgctaaggataaagacgggaaaccgaccatccagcgtgtccgcatcgtt
ccggaaaacaagcaaaactaa
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