Megasphaera massiliensis: LCQ47_03955
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Entry
LCQ47_03955 CDS
T07781
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax02024
Quorum sensing
mmax03060
Protein export
mmax03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LCQ47_03955 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LCQ47_03955 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCQ47_03955 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mmax02044
]
LCQ47_03955 (ffh)
Enzymes [BR:
mmax01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LCQ47_03955 (ffh)
Secretion system [BR:
mmax02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LCQ47_03955 (ffh)
Eukaryotic Sec-SRP protein
LCQ47_03955 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
APS_kinase
AAA_30
AAA_16
AAA_33
nSTAND3
FAS_AT_central
AAA_31
AAA_17
KTI12
Thymidylate_kin
ABC_tran
AAA_18
NPHP3_N
TsaE
ParA
6PF2K
AAA_7
ResIII
AAA
AAA_14
MeaB
KAP_NTPase
YqeC
MMR_HSR1
Ploopntkinase3
AAA_5
ArsA_ATPase
NACHT
AAA_24
NTPase_1
AAA_28
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UBS54348
LinkDB
All DBs
Position
complement(868605..869957)
Genome browser
AA seq
450 aa
AA seq
DB search
MPFESLSERFQAAFKKLCGKGKLSEEDVSEALKEMRRALLEADVNFAVTKDFIKKVKEKA
VGEEVFGSLNASQTVIKIVRDELTELLGGTQSRITIAPKPPTIIMLVGLQGAGKTTTAAK
LAKKLKSQGKSPLMVAADVYRPAAITQLQVLGQELDMPVYTEDGSKDPVAIAKHAIPYAT
SHLRDVVIIDTAGRLHINETLMDELIHIKENVHPHEILLVVDAMTGQDAVTAASAFDKAL
GIDGMIMTKLDGDARGGAALSIKAVTGKPIKFIGVSEKLDGIEEFHPNRYASRILDLGDV
ETIIEKAQAAFDEESMENMKKTMKSGSFTFDDFLSQLQMIKKMGNMGSILSLIPGIGKYK
KELDKVDMDGKEFKRIEAIITSMTAQERSSANPKMLIKDSRKRRIAKGSGTRVQDVNRLI
KQFTEMQKMMKQAKKAQKSKRRGFMPRLPF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgaaagtctgtccgaacgattccaggcggcctttaaaaagctttgcggcaaa
gggaagctttctgaagaggatgtcagtgaagccctgaaagagatgcgccgcgccttactc
gaagcggacgtcaactttgccgtcaccaaagactttatcaagaaggtcaaagaaaaagcc
gtcggtgaagaagtcttcggcagtttgaatgcgtcgcagacggtcatcaaaatcgtccgc
gatgaattgacggaactcctcggcgggactcagagccggattaccattgcgccgaagccg
ccgacgatcatcatgctcgtcggtctccaaggtgccggtaagacgacgacggcagcgaag
ctcgccaaaaaattgaagtctcaaggcaagagcccgctcatggtagccgccgacgtctat
cgcccggcagccatcacccagctgcaggtcctcggtcaggaactggatatgcccgtttat
accgaagacggcagcaaggaccccgttgccattgccaagcacgccattccctatgcgacc
agccatctgcgcgacgtcgtcatcatcgatacggccgggcggcttcatatcaacgaaacc
ttgatggatgaattgattcacattaaagaaaatgttcatcctcatgaaatcctcttagtc
gtcgacgctatgaccggtcaggatgccgttacggcggcatcggccttcgataaagccctc
ggcatcgacggcatgatcatgaccaagctcgacggcgatgcccgcggcggggccgccttg
tccatcaaggccgtcacgggcaaacccatcaaattcatcggtgtcagcgaaaagctcgac
ggcatcgaagaatttcatcctaaccgttacgcgtcgcgtatcctcgatttaggcgacgtc
gaaacgatcatcgaaaaagcccaggctgcttttgacgaagagtccatggaaaacatgaag
aagaccatgaagagcgggtcttttaccttcgatgatttcctctcccagcttcaaatgatt
aagaagatgggcaacatgggcagcatcttgagcctcattcccggcatcgggaagtacaaa
aaagaactcgacaaggtcgatatggacggcaaggaattcaagcgaatcgaagccatcatc
acatccatgacggctcaggaacggtcgagtgccaaccctaaaatgctgatcaaggacagc
cgcaagcgccgcattgctaaaggcagcggtactcgtgtccaagacgtcaaccgcctcatc
aagcagttcacggaaatgcagaagatgatgaagcaggccaagaaagcacaaaagagtaaa
cgacggggttttatgccgcgtctgcctttttaa
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