Megasphaera massiliensis: LCQ47_04450
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Entry
LCQ47_04450 CDS
T07781
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mmax
Megasphaera massiliensis
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_04450
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCQ47_04450
Archaeal homologous recombinant proteins
LCQ47_04450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_27
nSTAND_NTPase5
nSTAND3
AAA_21
T2SSE
ABC_tran
AAA_16
ATPase_2
AAA
ResIII
ABC_ATPase
AAA_19
NPHP3_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UBS54440
LinkDB
All DBs
Position
complement(962853..965897)
Genome browser
AA seq
1014 aa
AA seq
DB search
MIPIYLEMKAFGPYAGTEIVDFRRLKDHKLFLIYGPTGSGKTTILDAICYALYGSTSGDV
RTGAYMRSEYATPEEPTSVSFRFAIGRKYYRVYRSPEQQIAKKRGDGLKKASAQAALYET
DADGGDEKLIAPKNVTAAVEGLLGFKADQFRQVVLLPQGDFRKLLLANSGERQQIMQTLF
HTQQYAKLQALAKERHDELESRHEQVARDREQCLLNLGIDDEEKLPEREQEFRNQEASVS
EKWHKAEGERSARQKEFQAAQALEAHWKLWEQKRQEAADLDGQVGVFQDKRNKIDVLRKA
EVLAEPCRHLDELEREGKAAAKAADKANEAAQQAAADLKAAKEKMEKLSKQEGAYKSAGE
EQVRLTGLKDKADSYYDHCLLVKKLNGEAAFSEQEWTKARARKETEKAALEKAREALSTL
ADKALLAEQVKQQCQALTDHVSREKEAAALSLQKEDSLKQWQHLQSALEKAAQRARDERV
AYESVRAAFLQGQAAILAADLADGTPCPVCGATNHPMPAVPIDDLPTRDDVERRQKAAEK
SEQERQQLEVDTKAAETAYKALEGQYDRLRQQYPQRASLEDLEAQLKSALKQQTDLKKVL
SEGDRLRKDAADAEAKLRQWEGREEAARKAMEDAKTKAVKAGETQAHLEAELPEAYRDPK
ALSRRLAELTQHLKDYEEALQKSRDHLVSCERQGAQRQEEARSLTQQVLTLRSRFKQDYN
DLGQRVLAAGFASVRACRDMQPSVKDIPVLEGEVRQYETKLQQVRGQLEQEKAAIDGKSR
PDVPALEKILTEAEKTSRDLAEEKGRLSATFSQWQQEKKKLLALGKDEADLVEAYKTVGA
VYDLIAGKQTGINFERYVLGALLDDVLAAANERLQAMSRQRYSLQRSQSWDDKRVKQIGL
DIEVYDNYTGYARPANTLSGGETFLSSLALALGLADVVQAYSGGIHLDAIFIDEGFGTLD
SETLDYALKTLASLRSGGRLVGIISHVPELKERIDARLAIHKTDRGSTSSFEFS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatttatttagaaatgaaggcctttggcccttatgccgggacggaaatcgtt
gactttcgccggttgaaggatcataaattatttctcatctacggaccgaccgggtccggc
aagacgaccatcctcgatgccatctgttacgctctctacggcagtaccagcggcgacgtc
cgtaccggggcctatatgcgaagcgagtatgccacgccggaagagccgacgtccgtatct
tttcgctttgccatcggccggaaatactaccgagtctaccgcagtccggaacagcagatt
gccaagaaaagaggcgacggcttgaagaaggcctcagctcaggctgctttgtatgaaacc
gatgccgacggaggcgatgaaaaacttattgcgcctaaaaatgttacggctgctgtcgaa
gggctgttgggctttaaggccgatcagttccgacaggtcgtcctcctgccgcagggggac
tttcgaaaactcctcttggcgaactccggcgagcgtcagcagatcatgcagaccctgttc
catacacagcagtatgccaaacttcaggccctggccaaagaacgccatgacgagctggaa
agccgccatgaacaggtagcccgcgatcgggaacaatgtttgctcaatctcggcattgac
gatgaagaaaagcttccggaacgcgagcaggaatttcggaatcaggaagcttccgtgtcc
gaaaagtggcacaaagccgaaggtgagcgcagtgctcggcagaaagaatttcaggcagcc
caagccttggaagctcactggaaactctgggaacagaaacgacaggaagcagccgatctc
gacggtcaagtcggcgtttttcaagataagcgaaataagattgacgtcttacgaaaagcc
gaggtcttagccgaaccctgccgccatctcgatgagttggaacgggaagggaaggctgcc
gccaaggccgccgataaggccaatgaagcggcacagcaggctgctgccgacctgaaggcc
gccaaagagaagatggaaaaactttccaagcaggaaggggcctataagtcggccggtgaa
gagcaggtacggctgacgggcctcaaggacaaggccgattcctattacgatcactgcctg
ctggttaagaaactgaatggggaagctgctttttccgaacaggaatggactaaggccaga
gcccgaaaggaaacggaaaaggcggccttagagaaagcccgggaggccctttcgaccctg
gccgataaagcgctgttggctgaacaggtaaaacagcagtgccaggccttgacggatcac
gtttctcgggaaaaagaagctgcagccttgtcccttcaaaaagaggacagcctgaaacag
tggcagcaccttcagtcggccttagaaaaagctgctcagcgcgcgcgggatgagcgcgta
gcctatgaaagcgtccgggctgcattcttgcaggggcaagcggccattttggcggcagac
cttgccgatgggacgccgtgcccggtctgtggggccacgaaccatcccatgccggccgtt
cctatcgatgatttgccaacgcgggacgacgtcgaacggcggcaaaaagcggccgaaaag
agcgaacaggagcggcagcagctggaagtcgataccaaggctgccgaaacggcttataaa
gccttagaaggtcaatatgaccgcctccgtcagcagtatccgcaaagagcttccttagaa
gatttggaagctcaattgaaatcggccttgaagcaacagacggaccttaaaaaggtcctt
tccgagggagaccgccttcgtaaggacgccgccgatgctgaagcgaaacttcgtcaatgg
gaaggccgcgaagaagcggcccgcaaggcgatggaagacgctaagaccaaggccgtcaaa
gccggcgaaacccaggctcatttggaagcggaactgcccgaagcctatcgcgatcccaag
gcgctcagccgtcgtctggccgagttgacgcagcaccttaaagactatgaagaagccctt
cagaaaagtcgggaccatctggtaagctgcgaacgccaaggggctcagcgccaagaagaa
gcccggagcctcacccagcaggttctgaccctgcgcagtcgattcaaacaggactataac
gacctcggccaacgggtattagcagcgggctttgcctccgttcgtgcctgccgggatatg
cagccgtccgtaaaggatattcccgtcttggaaggagaagtccgtcaatatgaaaccaag
ctgcagcaggtacgaggccagctcgaacaggaaaaagcagccatcgacggcaagtctcgt
cccgatgtcccggctctggagaaaatcttgaccgaagctgaaaagacgagccgcgacctt
gccgaagaaaagggccgcctgtcggcgactttttcccagtggcagcaggaaaagaagaag
ctcttagccctcggtaaggacgaagccgatctcgtcgaagcctataagactgtcggcgcc
gtctacgatctcattgccggcaaacagacgggcatcaactttgaacgctacgtcttaggg
gccctcctcgacgacgtcttggccgccgctaatgaacggctccaggccatgagccgtcag
cgatacagcctgcagcgttcccaaagctgggatgataaacgggtcaagcagatcggcctc
gacatcgaagtctatgacaactatacgggctatgcccggccggccaacaccctatccggc
ggcgaaaccttcctgtcgtccctggctctggccctgggcctggcggacgtcgtccaagcc
tattccggcggcatccatctcgatgccatcttcatcgacgaaggcttcggcaccctcgac
agcgaaaccctggattacgccttaaagaccttggcttcccttagaagcggcggacgcctg
gtgggcatcatttcccacgtgccggaattaaaagaacggattgacgcccgtctggccatt
cacaagaccgatcggggcagtacgtcgtcctttgaattttcctaa
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