Megasphaera massiliensis: LCQ47_04460
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Entry
LCQ47_04460 CDS
T07781
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCQ47_04460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_04460
Enzymes [BR:
mmax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LCQ47_04460
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LCQ47_04460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
RhaA
Motif
Other DBs
NCBI-ProteinID:
UBS54442
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All DBs
Position
complement(967071..967904)
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AA seq
277 aa
AA seq
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MLHIGCHLSVSQGFLHMGDEALSIGADTFQFFSRNPRGSKVRKLDIDDMEALNELMKKHH
FAPILAHAPYTLNGCSQTEKTREFARQAMADDLRRLEYLDNCRYNFHPGSHVGQGPEKGI
NLIADMLNTCMFPEQKTTVLLETMAGKGTEVGRTFEELAAIIDKAVMNDKIGVCLDTCHV
FDGGYDIVHELDDVLLTFDKVIGLDRLKAVHINDSKNELASHKDRHEKIGEGHIGLAAFD
AIVNHPALRSLPFYLETPNELDGYAREIALLRSLQRS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatattggttgtcatctgtcggtgtcacaaggatttttgcatatgggtgacgaa
gctttatctataggagccgatacgttccaatttttttcgcgcaatccgcggggaagcaag
gtgcgaaagctcgatatcgatgatatggaagccttgaatgaactcatgaagaaacaccat
tttgctccgatcttagctcacgctccctataccttaaacggctgttcccagaccgaaaag
acacgggaatttgcccgtcaggccatggccgacgacctgcgtcgcctggaatacctcgat
aactgccgttataatttccatcccggcagccacgtcggccaagggccggaaaagggcata
aatcttattgccgacatgctcaacacctgcatgtttccggagcagaagacgacggtcctc
ttagaaaccatggccggcaaggggacggaagtcgggcggacctttgaagaattggcggcc
atcatcgataaggccgtcatgaatgataaaatcggcgtctgcctcgatacgtgccacgtc
tttgacggcggctacgacatcgtccatgagctcgacgacgtcctcttgaccttcgataag
gtcatcggcctcgatcggctgaaggccgttcacattaacgacagtaagaacgaactggcc
agccataaagaccgccacgagaaaatcggtgagggccatatcggcctggccgcctttgat
gccatcgtcaatcatccggccctgcggtccctgccgttttatttagagacgcccaatgaa
ctcgacggctacgcccgggaaattgcactgcttcgctccttacaacgatcgtaa
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