Megasphaera massiliensis: LCQ47_08010
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Entry
LCQ47_08010 CDS
T07781
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax03030
DNA replication
mmax03430
Mismatch repair
mmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCQ47_08010
03430 Mismatch repair
LCQ47_08010
03440 Homologous recombination
LCQ47_08010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmax03032
]
LCQ47_08010
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_08010
Enzymes [BR:
mmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCQ47_08010
DNA replication proteins [BR:
mmax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCQ47_08010
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCQ47_08010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
U-box_ZFPL1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UBS52848
LinkDB
All DBs
Position
1723277..1723831
Genome browser
AA seq
184 aa
AA seq
DB search
MLDFTAFDFETANKYANSACSLAAVTMNDDQCVRQGYTLIRPPFMVFDPGNIEIHGIQPE
QVAHKPKFDALWGNIRTHLEGRILVAHYAVFDTRVLRSLLKYYHLEKPQASYACTVEISR
RVWPDLPNHKLDTVAGYLGYSFQHHQALDDARACAHIVLKAAEAVGASSMEELLWKTNLK
LKQL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcttgattttacggcatttgattttgaaacggccaataaatacgccaacagtgcctgc
tcattggcggcggtcaccatgaatgacgatcagtgtgtccgccagggatataccttgatt
cggccgccctttatggtattcgacccgggaaacattgaaattcacgggattcagccggaa
caagtcgcccataaaccgaaattcgatgccttgtgggggaatatccgaacccatttagaa
gggcggattttggtggctcattacgccgtttttgatacgcgcgtcctgcgcagtctcctg
aagtactaccatttagaaaaaccacaggcttcgtatgcctgcacggtagaaatatcgcgc
cgcgtgtggccggatctgcccaaccataaactcgatacggttgccggttatctgggctat
tctttccagcaccatcaagcccttgatgatgccagagcctgtgctcacatcgtcttaaaa
gcagccgaagccgtaggcgcttcgtcgatggaagaattgttgtggaaaacgaatttaaaa
ttaaaacagctataa
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