Megasphaera massiliensis: LCQ47_08520
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Entry
LCQ47_08520 CDS
T07781
Name
(GenBank) DNA polymerase III subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax03030
DNA replication
mmax03430
Mismatch repair
mmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCQ47_08520
03430 Mismatch repair
LCQ47_08520
03440 Homologous recombination
LCQ47_08520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmax03032
]
LCQ47_08520
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_08520
Enzymes [BR:
mmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCQ47_08520
DNA replication proteins [BR:
mmax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCQ47_08520
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCQ47_08520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_25
AAA_16
AAA_5
DNApol3-delta_C
TIP49
Mg_chelatase
AAA_22
AAA_30
nSTAND_NTPase5
PhoH
NACHT
IstB_IS21
AAA_2
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
UBS52943
LinkDB
All DBs
Position
1823550..1824536
Genome browser
AA seq
328 aa
AA seq
DB search
MDETLFDTIIGHGRLKQKLARLIDEDRLPHAMIFAGPAGVGKTLMALAVASALAGRPVFR
DLAPSDDEALVADGDDAFYLAPMGAMLKVDQFRQLQGKLALQGERGRRRICIIDHVETMN
VEFANRMLKTLEEPPSGVCFILVTDQPDLLLPTILSRCVTFTFDPVGDDEMKEGLQRLHR
AGGNLDDAILWGGGIVRTVLRYLDGHGTEKAHFAVDFLTIMAKHACPYSKWLVVSANLTD
SDTTEILGWISLLLRDMAVLRSGAGREYVRLKGYISDMTELLPYWTDDAVFAVSSVLHEA
LEAVTRHVNVRLVWDYVSLQTIRLKGGF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaccttgtttgatacgatcatcggccatggccggttgaagcaaaaattggct
cgtctcatcgatgaagaccgccttcctcatgccatgattttcgccggccctgccggtgtc
ggcaagaccttgatggccctagccgtcgcctcagccctggccggccgccctgtctttcgc
gatttggcgccgtcagacgatgaagctcttgtcgccgatggcgatgacgctttttatttg
gcccctatgggtgccatgctgaaggtagatcaatttcggcagctccagggaaaactagct
ttgcaaggtgaacgaggccggcgtcggatctgcattatcgaccacgtagagacgatgaat
gtagaattcgccaaccgcatgctgaagaccttggaagagccgccgtccggtgtctgtttc
atcttagttacggatcagcctgatttgctgctgccgacgattctgtcgcgctgcgttact
tttaccttcgatcccgtcggtgacgatgaaatgaaggaagggttgcagcggctccatcga
gccggcggtaatttggatgacgctatcctgtggggcggcggtattgttcgcaccgttctt
cgttatctcgacgggcatggaacggagaaggctcattttgcggtggacttcttaacgatt
atggccaaacatgcctgtccctattcaaaatggcttgtcgtatcggctaatttgaccgat
agtgatacgacggaaatcttaggctggatcagtctgttgctgcgggatatggctgttctc
cgcagcggtgccggccgggaatatgtccgtttaaaaggttatatctccgatatgaccgaa
ttactgccgtactggacggatgatgccgtctttgccgtatcgtcagtgcttcatgaggcg
ctggaagcggtgacgcgccatgtaaatgtccgcttagtttgggactatgtcagtctccag
acgatacggctcaaaggaggattttaa
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