Megasphaera massiliensis: LCQ47_09175
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Entry
LCQ47_09175 CDS
T07781
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mmax
Megasphaera massiliensis
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_09175
Enzymes [BR:
mmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCQ47_09175
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LCQ47_09175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
zf-C4pol
Motif
Other DBs
NCBI-ProteinID:
UBS53065
LinkDB
All DBs
Position
1961261..1964668
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AA seq
1135 aa
AA seq
DB search
MAVTILMGKAGSGKSSQCFKELQAWEAGGGKAMLLVPDQATYGAERRLAEHAKGQGFVGT
QVVGFSRLAYNVFQEQGLSHASLSELARKIILQRLLHKGEKDFSLLQTAARQPNFADTAG
RFLGECRSFCVSPDDLRKAAESVSSTTLSHKLQDMALLYDMYQAFLSDHFGSADDTMTLL
AKTVDKDSFLQGARVWVDGFQWFTPQQMNILQQIEAVTDRLTITLTIDADHLLQQRRETA
LFHRAYEVYRDLQRLFPHLETAVVPEQPPKTLTAFQEDFFQVVPAVQSHPVSALSIWECQ
DKDGEIENIAREILRQCRKGRRFRDFLILARSSDMYHHRMERIFRRYGIPCFSDYRRPMT
SHPAAEAISALLSVFRSRWSHEALFRLLKSDLFPISRRDVDDLENYCLAYGIQGYHWLSG
KAWNYGRRHEGQAIIEEREEVQLQRIQAICQTVRDILMPAWEASQEVHCLRDWCTLLYQW
LRTLGVPAALSRWQEDDEAAGQTEAGKEHEQVWKRIMDFLTEIVDFCGDDVTDIDEFSQI
IEGGLATLKFSLIPPTLDHVTLTSVERGYTMQAPVVFLCGVNDGIFPQHSSEEGLFSDKE
RRSLADLGIVLGPGSRFRSFQERFLFYLAATRARERFVLSYMVADDDGSAVEKSSWIHQL
CDKGYVENIIRRDDAMDFSQEEKPVLALPAGLHYLPGQLRPALAGQAVDDTWWALYDWAF
KHGWHHQAVRAVQGLFHTNLPVTLPANLVRRLFAPDGVLRGSVTKFEQYRNCPFAYFSRY
GLNLEERRRYQFAAPDLGMLIHGALRIIGEKLLREKKQWQDIPDDEVPAICRQATDELAP
QVQHDILMSNAYFSQIKERLIQTLTRTVRRLCAFSAASGFRMTGLEKSFGRPGSPWEALH
FTLKNGLDVVVTGQIDRIDMLRRDDRTYVVVIDYKSGRKQLDISQIFMGLELQLLTYMFV
ALLNIGDGAVPAAVLYCYVRNDKVSLSYRIDEADKKKEYDAKGKLTGFYLNDGDVMKQLD
RSMEGFSDFLNLRLKKDGTLSEQSKTIYDEAGWSHLLAWASQKLQDLAGGIGDGDISIHP
VMLKQQTPCQYCPYRAVCRFDLSMAGNTYDAAGKEDTDDMIRTIFDRGDDDHGVD
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcagttaccattttaatgggcaaggccggaagcggcaaatcatcccaatgttttaaa
gagctgcaggcctgggaagcagggggcggaaaggcgatgctcctagtcccggaccaggcg
acatacggcgctgaacgtcggttggctgaacacgctaaagggcagggctttgtgggaaca
caggtcgtcggcttctcccgattggcctacaatgtgtttcaagagcaaggactttctcat
gcatcgctgtcagagttggctcggaagattattttacagcgcttgcttcacaagggcgaa
aaagatttttccctcttgcagacggctgccagacagcctaattttgccgatacggccggt
cgatttttaggggaatgccgctctttctgtgtatccccggatgacctgcgtaaagcggct
gaatctgtttccagtacgaccttatcccataagctccaggatatggctttattatatgat
atgtatcaggcttttctaagcgatcattttggatcagctgatgataccatgacgctattg
gcgaagaccgtcgataaggattcgtttttgcagggcgcccgcgtttgggtcgatgggttc
caatggtttacgccacagcagatgaatattttacaacaaatcgaagcggtgaccgaccgc
ttgaccattaccttgaccatcgatgccgaccaccttttgcagcagcgccgggaaacagcc
ctctttcatcgggcctatgaggtataccgcgatttgcagcgcctctttccgcatctggaa
acggccgtcgtcccggaacagccaccgaaaaccttgacggcctttcaggaggacttcttc
caagtggttccggcggtacagtcccatccggtatcggccctatctatttgggaatgtcag
gataaagacggtgaaatagaaaatatcgctcgggaaatcctccgccagtgccgcaagggg
cggcggttccgcgactttcttatcctggctcggtcgagcgacatgtaccaccatcggatg
gaacgcatctttcgccgttacgggattccctgtttcagcgattatcggcgtcccatgacc
agtcatccggccgccgaggccatttcggcactgctcagtgtttttcgcagccgttggtct
catgaggccttgttccgcctgcttaaaagcgacctctttcccatcagccgccgcgatgtc
gatgacttggagaactattgtctggcctatggcatacaaggctatcattggctgagtgga
aaggcgtggaactatggccgtcgtcatgaaggccaagccattattgaggaacgcgaagaa
gttcagctccagcggattcaagccatctgtcaaaccgtgcgggatatcttgatgccggct
tgggaggcatctcaggaggtacactgcctccgcgattggtgtaccttactgtaccaatgg
ctacggactctcggcgtcccggctgccctttctcgctggcaggaagacgatgaagcggca
gggcagaccgaagccggaaaagagcatgaacaggtttggaagcgaatcatggattttctt
acggaaatcgtcgacttctgcggtgacgatgtgaccgatatcgatgaattttctcagatt
atcgagggcggtttggctacactcaaattcagcctcattccgccgactttggaccatgta
acccttacctcagtcgaacgaggatatacgatgcaggcaccggtcgtctttttatgcggc
gtcaacgacggcatttttccgcagcacagcagtgaagaggggctgttcagtgataaggaa
cggcgcagtctggctgatctcggcatcgttctcgggccgggaagccggtttcgttccttc
caggaacggttcctgttctatttggcagcgacccgggcccgtgaacgctttgtcctttcc
tatatggtagccgacgatgacggcagtgctgtggaaaagtcgtcgtggattcatcaactc
tgtgataagggatatgtagaaaatatcattcgccgggatgacgcaatggatttttctcag
gaagaaaagccggttctggccctgcctgcgggacttcattacttgcccggtcagctgcgg
ccggccttagcggggcaggccgtggacgatacgtggtgggccctctatgactgggccttt
aagcatggctggcaccatcaggccgtacgggctgtccagggactcttccatacgaactta
ccggtgacactgccggcgaacctcgtacgccgcttatttgcaccggacggtgttttgcgc
gggtcggttacgaaatttgaacagtatcggaactgcccttttgcgtacttttcccgctat
ggacttaatcttgaagaacggcggcgctatcagtttgccgccccggacctggggatgctc
atccatggggcgctgcgcattatcggtgaaaaactacttcgagaaaagaagcagtggcag
gacattcccgacgacgaggtgccggctatatgccgccaggcgacggatgagctggcaccg
caggtccagcacgacattctcatgtcgaatgcttacttttcgcaaatcaaagagcgactc
atccaaacgctgactcgcacggtccgccgtctctgtgctttcagcgcagcttcgggattc
cggatgacgggcttggaaaaatccttcggccgtcccggaagcccttgggaagcccttcat
tttaccttgaaaaatggcctcgacgtcgtcgttaccggtcaaatcgaccgcatcgatatg
ctgcgccgcgacgaccgtacgtatgtcgtcgtcatagactataaatcggggcggaaacag
cttgatatcagtcagatttttatgggtctggagctgcagctgttgacctatatgtttgtc
gccctgctcaacatcggagacggtgccgttccggcagccgtgctttactgctacgtccgc
aatgataaagtgtcgttgtcatatcgtatcgatgaggccgataaaaagaaggagtacgat
gccaagggcaagttgaccgggttttatctgaacgacggtgacgtcatgaagcagttggac
cgttctatggaaggcttttcggactttttgaacttacgattgaagaaagacggtaccttg
agtgaacagtcgaaaacgatttacgacgaagccggttggagtcacctcctggcttgggct
tcacagaagcttcaggatttggccggcggcatcggtgatggcgatatttccattcatccg
gtcatgctgaagcagcagacaccgtgtcagtactgtccgtatcgagctgtctgccgattc
gacctttcgatggccggtaatacctacgatgcagccggcaaggaagatacggatgacatg
atacggactatttttgacagaggagatgacgaccatggcgtggactaa
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