KEGG   Megasphaera massiliensis: LCQ47_11635
Entry
LCQ47_11635       CDS       T07781                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
mmax  Megasphaera massiliensis
Pathway
mmax03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LCQ47_11635 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmax03400]
    LCQ47_11635 (uvrB)
DNA repair and recombination proteins [BR:mmax03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LCQ47_11635 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      LCQ47_11635 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 AAA_5 HEM4 UB2H AAA_25 AAA_7 DUF87
Other DBs
NCBI-ProteinID: UBS54818
LinkDB
Position
2491104..2493224
AA seq 706 aa
MSHYNKDYDTSHPFRVVAPYEPMGDQPEAIESLAEGIESGQWAQVLLGATGTGKTFTMAK
LIEKVQKPTLVIAHNKTLAAQLCSEFKAFFPDNEVGYFVSYYDFYQPEAYIASTDTYIEK
DASINDEIDKLRHSATMSLFERRDVIIVASVSCIYGLGDPEDYSELVVSLRLGQEKTQEE
ILRKLVDIQYNRNDMNLDRGTFRVHGDTIEVFPAAFDKSIIRIEMFGDEIDRLTEVDVLT
GEVIAERKHVAIYPASHYVTTKNKMERALGTISRELDERLKVLKDGEHLLEAQRLEQRTR
YDMEMMEEMGYCSGIENYSRHLAGRKAGQAPYTLLDYFPDDFMILVDESHVTLPQLRAMY
AGDRSRKESLIEYGFRLPSALDNRPLKFDEFVERINQIVYVSATPGPYEMDVETNMAQQI
IRPTGLLDPKVEVRPIEGQMDDLLGEIRKRTDKDERVLVTTLTKKMAEDLTDYLKEMGVR
VRYLHSDIATIERAEIIRDLRVGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSD
TSLIQTMGRAARNVEGTVIMYADKITDSMARAMDETQRRREIQDTYNKQHHITPKSVKKD
VVNLIELTKVAEDDAAYGGKKGGKGRAMTREALNKVIKTMTLQMKEASKRLEFERAAELR
DRLGQLRQQLADMSHDDTLPKEMGGEDMPSRRYRRKIKRPDAKKKR
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgtctcattacaataaagattacgatacgtcccatcccttccgcgtcgtcgccccttat
gaaccgatgggggaccagccggaagccattgaatccctggccgaaggcatcgagtccggc
caatgggcccaggtcctcctcggtgcgacggggaccggcaagacctttaccatggccaag
ctcatcgaaaaggtccagaaaccgaccttggtcatcgcccacaacaagaccctggcagcc
cagctgtgcagcgaattcaaggccttcttcccggataacgaagtcggctatttcgtcagt
tattacgatttttatcagcctgaagcctacatcgcttcgaccgatacgtatatcgaaaag
gatgcgtccatcaacgatgaaatcgataaactgcgccactcggcgacgatgagcctcttt
gaacggcgggacgtcatcatcgtcgcttccgtgtcctgcatctacggcctcggtgaccct
gaagactacagcgaactcgtcgtctctctgcgcctgggacaggaaaagacgcaggaagaa
atcttgaggaagctggtcgacatccagtacaaccgcaacgacatgaacctcgaccgcggg
accttccgcgtccacggcgacacgatcgaagtctttccggcggccttcgacaagtccatc
atccgcatcgaaatgttcggcgatgaaatcgaccgcctgaccgaagtcgacgtcctgacc
ggcgaagtcattgccgagcgcaagcacgtcgccatttacccggccagccattacgtcacg
accaagaacaagatggaacgggccttgggcaccattagccgggaattggacgaacgattg
aaagtactcaaagacggggaacacctcttggaagcccagcgcctggaacagcggacgcgg
tacgacatggaaatgatggaagaaatgggctactgctcgggcatcgaaaactattcccgc
cacttggccggccgtaaagccggacaggcgccgtacaccctcctcgattatttccctgac
gacttcatgattctcgtcgacgaatcccacgtcaccctgcctcagctgcgggccatgtat
gccggcgaccggtcgcggaaggaaagcctcatcgaatacggcttccgcctgccgtcggcc
ctcgacaaccggccgctgaagttcgatgaatttgtcgaacgcatcaatcagatcgtctac
gtcagcgccacgcccgggccgtatgaaatggatgtcgaaacgaatatggcccagcagatc
atccggcccacaggcctcctcgatcccaaggtcgaagtccgtcccatcgaaggccagatg
gatgacctcttaggggaaatccgcaagcggaccgacaaggacgaacgagtcctggtcacg
actttgaccaagaagatggccgaagatttgacggattatctgaaggaaatgggcgtccgc
gtccgctacctccattcggatattgctaccatcgagcgggctgaaatcatccgcgacctg
cgggtcggcgaattcgacgtcctggtcggcatcaacctcttgcgcgaaggcctggacatg
ccggaagtctctctggtggccatcctcgatgccgataaagaaggcttcctccgttccgat
acgtccctcatccagaccatgggccgggcggcgcgaaacgtcgaagggacggtcatcatg
tatgccgataagattaccgattccatggcccgcgctatggacgaaacccagcgccgccgg
gaaattcaggatacctataataaacagcaccatattacgccgaagtcggtcaaaaaagac
gtggtcaacctcattgaactgaccaaggtcgccgaagacgatgcggcctacggcggcaag
aagggcggcaaaggacgggccatgacccgggaagccctgaacaaggtcattaagaccatg
accctgcaaatgaaggaagcgtcgaagcggctggaatttgaaagggctgccgaactgcgc
gaccgcttagggcagctgcgccaacagttggccgacatgagccacgacgacaccctgccg
aaagaaatgggcggggaagacatgcccagccgccgctaccggcgaaagatcaagcggccc
gatgccaagaagaagcgctag

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