Methanosarcina mazei Tuc01: MmTuc01_1053
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Entry
MmTuc01_1053 CDS
T02477
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmaz
Methanosarcina mazei Tuc01
Pathway
mmaz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmaz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MmTuc01_1053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmaz03000
]
MmTuc01_1053
03021 Transcription machinery [BR:
mmaz03021
]
MmTuc01_1053
Transcription factors [BR:
mmaz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MmTuc01_1053
Transcription machinery [BR:
mmaz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MmTuc01_1053
RNA polymerase III system
TFIIIB
MmTuc01_1053
RNA polymerase I system
SL1/TIF-1B
MmTuc01_1053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
AGF96448
UniProt:
M1Q8G5
LinkDB
All DBs
Position
complement(1016730..1017281)
Genome browser
AA seq
183 aa
AA seq
DB search
MSESSIKIENVVASTKLAEEFDLTVIESQFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVADVHTVIGNMAKKLNSIGIKTMENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKTPEDCESGVEVVRQQLDNM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctagcatcaaaatcgaaaacgtggttgcatccaccaaactcgctgaagag
tttgatttaactgtgatagaatcccagttcgaaggggctgagtataacaaacagaagttc
cctggactcgtctacagagtctctgaccctaaagctgcttttctggtatttacttccgga
aaggttgtctgcacaggagcaaaaaacgttgctgacgtgcacacagttatcggcaacatg
gcaaaaaagctgaacagcatcgggatcaaaacaatggaaaacccgcagattactgttcag
aatatagtcgcttcagcagatctgcacaccattcttaacctcaatgcaattgcaataggg
cttgggcttgagaatatcgaatacgaacccgaacagtttccgggtcttgtttacaggatc
gatgagcccaaagtagttgtccttattttcagctccggaaaacttgtagttacaggcggc
aagacgcctgaagattgcgagagcggcgttgaagtagtccgtcagcagctcgacaatatg
gggcttttataa
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