Methanosarcina mazei Tuc01: MmTuc01_1897
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Entry
MmTuc01_1897 CDS
T02477
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mmaz
Methanosarcina mazei Tuc01
Brite
KEGG Orthology (KO) [BR:
mmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmaz03016
]
MmTuc01_1897
Enzymes [BR:
mmaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
MmTuc01_1897
Transfer RNA biogenesis [BR:
mmaz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
MmTuc01_1897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Sigma_reg_C
B
Motif
Other DBs
NCBI-ProteinID:
AGF97236
UniProt:
M1PY42
LinkDB
All DBs
Position
1879404..1879949
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AA seq
181 aa
AA seq
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MIRTFVAVELDPGFGGKIRQVQERFSEFDLKFVNPEIVHITLKFLGDIKESKVPSIAAAL
DSIMCEPFEAKIGGLGVFPKPSNPKVLWLRSAGNFETLHNDVETVLKPFGFKEEERGFTA
HATLARVKSLNKDQKNSFINILKELKNIEIGSMQVNKVLLKKSTLTPEGPIYETLHTVYL
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgataaggacatttgtcgcagtggagctagatcctggtttcggggggaaaatccgccag
gttcaggaaaggttttcagagtttgacctgaagtttgttaaccccgaaattgttcatata
accctgaagtttctgggcgatattaaagaatcaaaggtcccatccattgctgcagctctt
gattccattatgtgcgagcctttcgaagcaaaaatcgggggtcttggggtttttcctaag
ccttcaaaccctaaagtcctgtggctgagatcggcaggaaactttgaaactcttcacaat
gatgtggaaacagtactgaaacccttcgggttcaaagaggaagaaagaggttttactgcc
catgcgactcttgcaagggtaaaatctctgaataaagatcaaaaaaattcttttataaat
atccttaaagaattaaagaatatcgagattggaagtatgcaggtgaacaaagttcttctt
aaaaaaagtactcttactcctgaaggtcctatctatgagactctgcatacggtatacctt
gactga
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