Entry |
|
Name |
(GenBank) RNA-binding protein, containing S1 domain
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KO |
K07573 | exosome complex component CSL4 |
|
Organism |
mmaz Methanosarcina mazei Tuc01
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mmaz00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmTuc01_1954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mmaz03019]
MmTuc01_1954
Messenger RNA biogenesis [BR:mmaz03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MmTuc01_1954
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MmTuc01_1954
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
1935014..1935964
|
AA seq |
316 aa
MIRIRKNKTTRKKLTGPGEGKNGAEKSAPSNEESRDQFKGQQKDQPRTQFKSQPREQSRD
QFKGQPRAQYKSQPRDQSRGQFRDQSRDQFKGSPDKKRKFPYSKKGPRDRKETPGFRPPT
AEAVVSEEDLEKGGFVLPGELVGTTEEFKSGNGTAVIAGDIYSTATGNVLIDRKARVVSV
KPNTITPNILKVGDVVYGRISDVRESGAMVEVAGIEGKENREIVSVRTGDIHVSSVRDSY
VKRLADEFRPSDIVRAKVVDVERMRLTTAEDSLGVVKAYCSNCKGELVLEGKKLKCPVCN
MTETRKISTEYGKGIR |
NT seq |
951 nt +upstreamnt +downstreamnt
atgattagaattcgaaaaaataagactaccaggaaaaaattaacaggtcctggtgaagga
aagaacggagctgagaaatcggctccttcaaatgaagaaagcagggatcaatttaagggt
cagcaaaaggatcagcccaggactcaatttaaaagccagcccagggagcagtcaagagac
cagtttaaaggtcagccccgagctcagtataagtctcagcccagagaccagtccagaggg
caattcagagaccagtcaagggaccagttcaaaggcagccctgataaaaagagaaaattc
ccatattccaagaaaggtcccagagatagaaaggaaactccgggtttcaggccccctacc
gcagaagccgttgtatctgaagaagatctcgaaaaaggaggctttgtacttcctggagaa
cttgtcggaactacagaagagttcaaatcgggcaatggaactgcagtaattgcaggagac
atctattccactgctacgggtaatgtgctcattgacagaaaagccagagtggtctcggta
aagccaaacacaattactccaaatatcctcaaagtaggagatgtcgtgtacgggcggata
tctgacgtccgtgagtccggggcaatggtggaagtcgcaggaattgaagggaaagaaaac
agggaaatcgttagtgtaaggaccggagatattcatgtctccagtgtgagagattcctat
gtgaagaggctggcagatgagttcaggccttctgacatagtaagagcaaaggtagttgac
gttgaaagaatgcgccttactacagctgaagattctcttggagttgtaaaagcttactgt
tcaaactgcaaaggagaacttgtgctggaagggaaaaagcttaaatgcccggtctgcaat
atgactgaaacccgcaagatctcaactgagtatgggaaagggatcaggtaa |