Methanosarcina mazei Tuc01: MmTuc01_2052
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Entry
MmTuc01_2052 CDS
T02477
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmaz
Methanosarcina mazei Tuc01
Pathway
mmaz03410
Base excision repair
mmaz03430
Mismatch repair
mmaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MmTuc01_2052
03430 Mismatch repair
MmTuc01_2052
03440 Homologous recombination
MmTuc01_2052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmaz03400
]
MmTuc01_2052
DNA repair and recombination proteins [BR:
mmaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MmTuc01_2052
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MmTuc01_2052
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MmTuc01_2052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
SelA
Motif
Other DBs
NCBI-ProteinID:
AGF97384
UniProt:
M1QK92
LinkDB
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Position
complement(2024642..2026042)
Genome browser
AA seq
466 aa
AA seq
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MTEIIEIFRKEAGRCAEKIKKHRSVHVVSHIDADGLTSAGIICTALERGNFDYTTRFVKQ
LDEKALNTIADENHELVVFTDLGSGMCEHIKSRGINAVISDHHQPQGTLEFHLNPHLFGA
NGSYELSGSGSTYLLASALGKNRDLSSLAIVGAIGDMQHLKMGQLVGINRIILEEGVKGG
DLEFKKDLTLFGKQTRPIYKLLQYSSDPYLPGLTGDEEACINFLHSLNIRFSQDERWRRW
IDLEITEKQKIISGLFQYCLKSGIPSYKIERLIGEVYVLLKEREGTEMRDASEFSTLLNA
TARYDHAEIGLAVCMGDRETAYEDARKLLAEHRQNLVNGLMYVKEKGVTQLENIQYFDAG
SHIKETIVGIIAGMSSTIVENRNLPIIAFAKAEGGIKVSARGTQDLIRRGVNLSEAMSTV
SAEVGGAGGGHDIAAGATIPENAKEEFARKLDFFIGEQLRRKANTG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatcatagaaatattcagaaaagaagcaggcagatgtgccgaaaaaatcaaa
aaacatagatctgtacatgtagtatcccatatagatgcagacggattgacctctgcgggg
attatctgtacagctcttgaaaggggaaatttcgattatacaacccgttttgtaaagcaa
ctagatgaaaaagccctcaataccatcgcagatgagaaccatgaacttgtggtttttaca
gaccttggaagcggaatgtgcgagcatataaagtcccgcgggatcaatgccgtaatctca
gaccatcaccagccgcaggggacccttgaatttcacttaaaccctcacctttttggggca
aacggctcttacgaacttagcggttcgggaagcacctaccttcttgcttcagccctggga
aaaaacagggatctttcctcacttgccatagtcggcgctataggagatatgcagcacctg
aaaatggggcagcttgtagggattaacaggataattctggaagaaggagtaaaaggaggg
gatcttgagttcaaaaaagatttgaccctgttcgggaagcaaacccgccctatttacaag
cttttgcagtattcatccgatccatatcttcccggacttaccggagatgaagaagcctgc
attaatttccttcattcccttaatatccgtttcagccaggatgaacgctggaggcgctgg
attgacctggagattacggaaaaacagaaaataatttcgggacttttccagtactgcctg
aaatcagggataccttcgtacaaaattgagcgactgataggcgaggtctatgtccttctt
aaagaacgtgaaggaacggaaatgagagacgcctccgaattttctacacttctcaatgct
actgcgagatacgaccatgcagaaataggacttgcagtctgtatgggagacagggaaact
gcttacgaagacgccagaaagctactagcagaacacaggcaaaaccttgtcaacgggctt
atgtacgtaaaagagaagggagtcacccagctggaaaacatccagtattttgatgcaggt
tctcatattaaggaaaccattgtgggaataatcgcaggcatgagttccacaatagtcgaa
aatagaaaccttccgattattgctttcgcaaaggcagagggagggattaaggtatcagca
aggggcacgcaggaccttatccgcagaggggtaaacctgtctgaagcaatgtcaaccgtt
tcggcagaagtcggaggtgcaggcggcgggcatgatattgccgcaggagcaaccattcct
gagaatgcaaaagaagagtttgccaggaaacttgactttttcataggggaacaacttcga
agaaaagcaaatacaggataa
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