Methanosarcina mazei Tuc01: MmTuc01_2682
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Entry
MmTuc01_2682 CDS
T02477
Name
(GenBank) Ribonuclease PH
KO
K11600
exosome complex component RRP41
Organism
mmaz
Methanosarcina mazei Tuc01
Pathway
mmaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmTuc01_2682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaz03019
]
MmTuc01_2682
Messenger RNA biogenesis [BR:
mmaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MmTuc01_2682
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MmTuc01_2682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AGF97972
UniProt:
M1PBT2
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All DBs
Position
2651509..2652906
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AA seq
465 aa
AA seq
DB search
MKIEVGVLSRADGSCYLEWGRNKILVGVFGPREAHPRRSQRADSAVIRYRYNMASFSVED
RARPGPSRRSIEISKVSREAFEPVIMAELFPKTAIDIFVEVLQADAGTRTAAINASSIAL
ADAGIPMKGLITSCAFGKVDGKIVLDLNKEEDNYGEADFPVAMTQDGEITLIQMDGNLTP
DEIKQGLELVKKGCKEILEIQQAVLRKKFETPVEEVSEEAAPEKGAEKEVLESSSVAAIV
EETPEEAEEPEVEISEEEVEAEILASEVIPDFEDELEEEIEEELEESEEDLETEEEEFEE
EALEEEAEPEEDLEEDLEEDLGEELEEEEELEEEEFEEEALEEENELEASLECAPELKEF
DEIEARLEKEDASIEAEEEIEPEAEEATEEGLEEEAEIEETAASEEENIEAEAEAEEEAE
PEVEAEEISTEAEEAEEEPEEEKSEGPWKVVKDPSEAGTRGEKDE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgaagtcggtgtactttcgcgagctgatggttcatgttatcttgaatggggc
aggaataagatccttgtaggcgtgtttggccccagggaggctcatccccgccgtagccag
cgtgcggattcggcagttatccgttacagatataatatggcttcattctctgtagaagac
cgtgctcgtccggggccaagcaggcggagcatcgagatatcaaaggtttccagggaagct
ttcgagcctgtgataatggctgagctgtttccgaaaacagcaattgatatttttgttgaa
gttctccaggcagatgcagggacaaggacagcagcaatcaatgcttcaagcatagccctt
gcagacgccggaattcctatgaaaggacttattacctcgtgcgctttcgggaaagttgac
ggaaagattgttcttgaccttaataaggaagaggacaactacggagaggctgacttccct
gtagcaatgacacaggacggagagattactctgatccagatggatgggaaccttactcct
gatgaaataaagcagggcctggaactcgtgaagaaaggctgtaaggaaatccttgaaatc
cagcaggcagtcctgagaaagaagtttgaaacccctgttgaagaggtttctgaagaagca
gcccctgaaaagggagccgaaaaagaagtgctggaatcttcctctgtagctgcaattgtt
gaagaaactcctgaagaagcagaagaacctgaagtagagatttcagaagaagaagttgaa
gctgaaatccttgccagtgaggtaattcccgactttgaagacgagctcgaagaagagatc
gaggaggaacttgaagaatctgaggaagatctcgaaaccgaagaagaggaatttgaagag
gaagctttagaggaagaagctgaacctgaagaagacctggaagaagacttggaggaagat
ctgggagaggagctcgaggaagaagaggagcttgaagaagaggaatttgaagaggaagct
cttgaagaagagaatgaactcgaagcctccttagaatgtgcacctgaactcaaagagttt
gacgaaattgaagcaaggctcgaaaaagaagatgcttccatagaagcagaagaggaaatt
gagcctgaagctgaggaagctaccgaagaagggctggaagaagaagccgaaattgaggaa
actgctgcatcagaagaagaaaatattgaggctgaagcagaagctgaagaagaggccgaa
cctgaggttgaggcagaggaaatttccactgaggctgaagaagctgaagaagagcctgag
gaggaaaaatccgaaggtccctggaaggtagtaaaagatccctctgaagccggaaccaga
ggtgaaaaagatgagtga
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