KEGG   Methanosarcina mazei Tuc01: MmTuc01_2682
Entry
MmTuc01_2682      CDS       T02477                                 
Name
(GenBank) Ribonuclease PH
  KO
K11600  exosome complex component RRP41
Organism
mmaz  Methanosarcina mazei Tuc01
Pathway
mmaz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmaz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MmTuc01_2682
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmaz03019]
    MmTuc01_2682
Messenger RNA biogenesis [BR:mmaz03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MmTuc01_2682
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     MmTuc01_2682
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: AGF97972
UniProt: M1PBT2
LinkDB
Position
2651509..2652906
AA seq 465 aa
MKIEVGVLSRADGSCYLEWGRNKILVGVFGPREAHPRRSQRADSAVIRYRYNMASFSVED
RARPGPSRRSIEISKVSREAFEPVIMAELFPKTAIDIFVEVLQADAGTRTAAINASSIAL
ADAGIPMKGLITSCAFGKVDGKIVLDLNKEEDNYGEADFPVAMTQDGEITLIQMDGNLTP
DEIKQGLELVKKGCKEILEIQQAVLRKKFETPVEEVSEEAAPEKGAEKEVLESSSVAAIV
EETPEEAEEPEVEISEEEVEAEILASEVIPDFEDELEEEIEEELEESEEDLETEEEEFEE
EALEEEAEPEEDLEEDLEEDLGEELEEEEELEEEEFEEEALEEENELEASLECAPELKEF
DEIEARLEKEDASIEAEEEIEPEAEEATEEGLEEEAEIEETAASEEENIEAEAEAEEEAE
PEVEAEEISTEAEEAEEEPEEEKSEGPWKVVKDPSEAGTRGEKDE
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaaaattgaagtcggtgtactttcgcgagctgatggttcatgttatcttgaatggggc
aggaataagatccttgtaggcgtgtttggccccagggaggctcatccccgccgtagccag
cgtgcggattcggcagttatccgttacagatataatatggcttcattctctgtagaagac
cgtgctcgtccggggccaagcaggcggagcatcgagatatcaaaggtttccagggaagct
ttcgagcctgtgataatggctgagctgtttccgaaaacagcaattgatatttttgttgaa
gttctccaggcagatgcagggacaaggacagcagcaatcaatgcttcaagcatagccctt
gcagacgccggaattcctatgaaaggacttattacctcgtgcgctttcgggaaagttgac
ggaaagattgttcttgaccttaataaggaagaggacaactacggagaggctgacttccct
gtagcaatgacacaggacggagagattactctgatccagatggatgggaaccttactcct
gatgaaataaagcagggcctggaactcgtgaagaaaggctgtaaggaaatccttgaaatc
cagcaggcagtcctgagaaagaagtttgaaacccctgttgaagaggtttctgaagaagca
gcccctgaaaagggagccgaaaaagaagtgctggaatcttcctctgtagctgcaattgtt
gaagaaactcctgaagaagcagaagaacctgaagtagagatttcagaagaagaagttgaa
gctgaaatccttgccagtgaggtaattcccgactttgaagacgagctcgaagaagagatc
gaggaggaacttgaagaatctgaggaagatctcgaaaccgaagaagaggaatttgaagag
gaagctttagaggaagaagctgaacctgaagaagacctggaagaagacttggaggaagat
ctgggagaggagctcgaggaagaagaggagcttgaagaagaggaatttgaagaggaagct
cttgaagaagagaatgaactcgaagcctccttagaatgtgcacctgaactcaaagagttt
gacgaaattgaagcaaggctcgaaaaagaagatgcttccatagaagcagaagaggaaatt
gagcctgaagctgaggaagctaccgaagaagggctggaagaagaagccgaaattgaggaa
actgctgcatcagaagaagaaaatattgaggctgaagcagaagctgaagaagaggccgaa
cctgaggttgaggcagaggaaatttccactgaggctgaagaagctgaagaagagcctgag
gaggaaaaatccgaaggtccctggaaggtagtaaaagatccctctgaagccggaaccaga
ggtgaaaaagatgagtga

DBGET integrated database retrieval system