Methanosarcina mazei Tuc01: MmTuc01_2683
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Entry
MmTuc01_2683 CDS
T02477
Name
(GenBank) Exosome complex exonuclease 2
KO
K12589
exosome complex component RRP42
Organism
mmaz
Methanosarcina mazei Tuc01
Pathway
mmaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MmTuc01_2683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaz03019
]
MmTuc01_2683
Messenger RNA biogenesis [BR:
mmaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MmTuc01_2683
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MmTuc01_2683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
HopA1
Motif
Other DBs
NCBI-ProteinID:
AGF97973
UniProt:
M1QCM3
LinkDB
All DBs
Position
2652899..2653690
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AA seq
263 aa
AA seq
DB search
MSEIIATLKKDYIYNLMIKDKRQDGRGFKDFRELKLETNVISKAEGSAKVTLGNTQVLVG
VKLQTGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREDAIEMARVVDRGIRESGAIDI
KKLCITVGESVWIVFIDVHILNNDGNIIDASCLAAIAALMTTMVPNEQQGLGENVPLAMK
EMPVGITLAKIGSKLMVDPSLDEEAVCETKLTIVSSSDGSVAGMQKMGPVPLTEAELFEA
IDMAIEKAAEIRGLYLEGLAKNE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatcatagccacacttaagaaggattatatttacaacctgatgatcaaagat
aagcgccaggacggtcgcggctttaaagatttcagggaactcaaactcgaaacaaatgtt
atctccaaagcagaaggttctgcaaaggtcacccttggaaacactcaggtgcttgtaggt
gtgaaacttcagactggaaccccgttcccggattcccaggatgaaggtgtgatcattacc
aaccttgagcttaaccccatagcttctcctgagtttgagcccgggccaccgagagaagat
gcaatcgaaatggcaagggtcgttgacagggggatcagggaatcaggcgcaattgatata
aagaagctctgcataacggttggagaatccgtctggattgtctttatagacgtccatatc
ctgaataacgacggaaatatcattgatgcatcctgtctcgctgcaattgcagccctcatg
accaccatggtcccgaacgagcagcagggacttggcgagaacgtgccccttgctatgaaa
gagatgcctgtcggcataacacttgccaagatcggctcaaaacttatggttgacccctcg
cttgatgaggaagcggtctgcgaaacgaaactgacaatagtttcaagttcggacgggtct
gttgcaggcatgcagaaaatgggccctgtcccccttacagaggcagagctcttcgaagct
atagatatggcaatcgaaaaggcagctgaaatccgcgggctttaccttgaagggctcgca
aaaaatgaataa
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