Methanosarcina mazei Tuc01: MmTuc01_2772
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Entry
MmTuc01_2772 CDS
T02477
Name
(GenBank) Phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmaz
Methanosarcina mazei Tuc01
Pathway
mmaz03410
Base excision repair
mmaz03430
Mismatch repair
mmaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MmTuc01_2772
03430 Mismatch repair
MmTuc01_2772
03440 Homologous recombination
MmTuc01_2772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmaz03400
]
MmTuc01_2772
DNA repair and recombination proteins [BR:
mmaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MmTuc01_2772
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MmTuc01_2772
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MmTuc01_2772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AGF98058
UniProt:
M1QCU0
LinkDB
All DBs
Position
complement(2746864..2747853)
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AA seq
329 aa
AA seq
DB search
MTDAQNQLKAKTLILTHGDSDGICSGALAKSAFPDAYVYFTSPVSLLEKLNLIEYVETLI
ICDIAIDERYCTELQSALGKFAEECNLYYIDHHPLPERCSKEEWFYHETEVCASELTYRV
FEDLLSSEMKRVAIYGAIGDFSDNTPCVKDWVKDWDKRSLYFQAGTLIQAILHKGKDYEF
KRTLLEPLSKNVIPSNIPDLLELAREAAINEEKIRFCVKKSVKVLKNSAYVVNTNNSISK
AAIYAASYGRREVGIAAEYREKKGAYDLSIRSRGEVDLNRILRSVAPSFGGSGGGHPVAA
GARIPKDSLESFLRAFDKKIGEAKEVKQK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgctcagaaccagctcaaagcaaaaaccctgatccttactcatggggactct
gacgggatatgttcgggagcacttgcaaaaagcgcttttcctgatgcatatgtatacttt
acaagccctgtcagccttcttgaaaaattaaatcttatagaatatgttgaaactctcatt
atctgcgatattgctattgatgaaaggtactgcactgaactccaatctgcacttgggaag
tttgcggaagaatgtaacctttattacattgaccaccacccacttccggaaaggtgcagt
aaagaagaatggttttaccatgaaacagaagtatgcgcttcagagctgacttatagagtt
tttgaagaccttctgagctcagagatgaaaagagttgcaatttacggggctataggggac
ttcagtgataacaccccctgtgtaaaggactgggtgaaagactgggacaaaagaagcctc
tatttccaggcagggaccctgatccaggcaatacttcataagggaaaagattatgaattc
aaaaggactctgcttgaacccctttcaaaaaatgtaatcccttcaaatatcccggatctg
ctcgaactcgcaagagaagctgcaattaacgaagaaaaaatccggttctgcgtaaaaaaa
agtgttaaagtcctcaaaaacagcgcgtatgttgtaaatacgaataactccatttcaaaa
gcagcaatctatgcagcttcctacggccggagggaggttggaattgcagcggaatacagg
gagaaaaagggagcgtatgacctgagtatacgttcccgcggagaagtagacctgaaccga
atccttcgctcagttgctcccagttttggagggagcggaggcgggcaccctgttgcggca
ggagcacgaataccgaaagattctctggaaagttttctccgggctttcgataaaaagatc
ggagaagcaaaagaggttaaacaaaaatga
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