Methylotenera mobilis: Mmol_0215
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Entry
Mmol_0215 CDS
T00942
Name
(GenBank) 3' exoribonuclease
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mmb
Methylotenera mobilis
Pathway
mmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmol_0215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmb03019
]
Mmol_0215
03016 Transfer RNA biogenesis [BR:
mmb03016
]
Mmol_0215
Enzymes [BR:
mmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Mmol_0215
Messenger RNA biogenesis [BR:
mmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Mmol_0215
Transfer RNA biogenesis [BR:
mmb03016
]
Prokaryotic type
tRNA degradation factors
Mmol_0215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_TP0910
KH-I_KHDC4-BBP
KH_SLS1_2
DUF5813
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ACT47125
UniProt:
C6WSN3
LinkDB
All DBs
Position
235513..237642
Genome browser
AA seq
709 aa
AA seq
DB search
MFNKFTKSIQYGAHTLTLETGEISRQADAAVMVSYGDTVVLVAVTSKREVKAGQDFFPLT
VDYMEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPLRPLFPEAFYNEVQVVATVLSS
DPEIDADIPAIIGASAAMSLSGIPYYGPLGAARVGYINDEYVLNPTKAQLEETELDLVVA
ATESAVMMVESEAKELSEEVMLGAVVYGHEQMQAVIKMISELAAEAGKDAWDWVAPEPDT
ALIEKVASLAAADINAAFQIKAKGARSAKLEEITSRVLAELITEETSTTEANKIKNEIFN
LEAKTVRSQILNGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVVATLGTG
RDEQIIDALQGEYADRFMLHYNMPPYATGETGRVGTPKRREIGHGRLAKRALVAALPAKE
DFDYTMRVVSEITESNGSSSMASVCGGCLALMDAGVPMKNHVAGIAMGLIKEGNRVAVLT
DILGDEDHLGDMDFKVAGTEDGITALQMDIKITGITAQIMQVALAQAKEGRAHILGIMKQ
AVSGANTEMSQFAPRIITMKINPEKIRDVIGKGGAVIRALTEETGTTIDIEDDGTVKIAC
TSSEQGAEAQRRIAEITAEVEVGQTYEGTVIKLLDFGAIVTLIPGKDGLLHISQIAHQRV
NAVADFLKEGDVVKVKVVEADEKGRVRLSMKALIDPPAAEAKAETEADE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatttactaaaagtattcaatacggcgcgcatacgctaacccttgaaacc
ggtgaaatctcacgccaagcagatgctgcggtgatggtgagctacggtgacacggtagtg
ttagtggccgtaaccagcaagcgtgaagttaaagccggtcaggacttcttccctttgact
gtagactacatggaaaaaacctatgctgcgggcaaaatcccaggtggttttttcaaacgc
gagggccgtccttcagaaaaggaaacgttgactagccgtttgatcgatcgtccattacgt
cctctgttcccagaagcgttctataacgaagtgcaagtggtggcaactgtgttgtcatca
gaccctgaaatcgatgcggatattcctgcaattatcggtgcatctgcggcaatgtcatta
tctggtattccatactatggtccactaggtgctgcacgtgttggttatatcaacgatgag
tatgtattaaacccaactaaagcccagttggaagaaactgagttggacttggttgttgca
gcaactgaaagtgctgtaatgatggtggaatctgaagctaaagagttgtcagaagaagtg
atgctaggcgcagttgtttatggtcacgagcaaatgcaagctgtgattaaaatgattagc
gaattagctgctgaagcgggtaaagatgcttgggactgggttgcgccagagccagacact
gcattgattgagaaagtagcaagcttggctgctgctgatatcaatgctgctttccaaatt
aaagctaaaggcgcacgttcagctaagttagaagaaatcaccagccgtgtattggctgag
ttgattacagaagaaacttcaaccactgaagccaacaaaattaaaaatgaaatctttaat
ttagaagctaaaactgtacgtagccaaattctaaatggcgagccgcgtattgacggtcgt
gatacacgcactgtgcgtcctatcagcatccgtactggcgtattgccgcgcactcacggt
tctgcattgttcacccgtggtgaaacacaggctttggttgtagcaactttaggtacaggc
cgtgatgagcaaatcatcgacgcgctgcaaggtgagtatgcagaccgctttatgttgcat
tacaacatgcctccgtacgcaactggtgaaactggccgtgtaggtacgccaaaacgccgc
gaaatcggccatggtcgtttagctaagcgcgctttggtagctgcattgccagctaaagaa
gatttcgattacaccatgcgtgtggtttctgaaattacagaatctaacggttcaagctct
atggcttccgtatgtggtggctgtttggcattgatggacgctggtgtgccgatgaaaaat
cacgttgcaggtattgcgatgggtttgatcaaagaaggtaatcgcgtagcggtattgact
gacattttaggtgatgaagatcacttgggtgatatggactttaaagtagctggtacagaa
gatggtatcactgcgttgcaaatggacattaaaatcaccggcatcactgcacaaattatg
caagtggctctagcgcaagctaaagaaggtcgcgcgcatatcttgggtatcatgaagcaa
gcggtgagtggcgctaatacagaaatgtcacaatttgcaccacgcatcatcaccatgaag
atcaatcctgagaaaatccgtgatgtaatcggtaaaggtggcgcggttattcgtgcttta
actgaagaaaccggcactacgattgatatcgaagatgacggtacagtgaaaattgcatgc
acaagctcagagcaaggtgcggaagcgcaacgtcgcattgcagaaatcactgctgaagtg
gaagttggccaaacttacgaaggtactgtgatcaagttgcttgatttcggtgcaatcgta
acattgattccaggtaaagatggcttgctacacatttcacaaatcgcacatcaacgcgta
aatgcagttgctgacttcttgaaagagggcgatgtagtgaaggtgaaagtggttgaggct
gatgagaaaggccgtgtacgtctaagcatgaaagctttgattgacccgccagctgcagaa
gctaaagctgaaacagaagctgacgagtaa
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