Methylotenera mobilis: Mmol_0954
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Entry
Mmol_0954 CDS
T00942
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmb
Methylotenera mobilis
Pathway
mmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmol_0954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmb03019
]
Mmol_0954
03400 DNA repair and recombination proteins [BR:
mmb03400
]
Mmol_0954
Enzymes [BR:
mmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmol_0954
Messenger RNA biogenesis [BR:
mmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmol_0954
DNA repair and recombination proteins [BR:
mmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mmol_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
HRDC
Helicase_C
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ACT47863
UniProt:
C6WVB4
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All DBs
Position
complement(1036527..1038362)
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AA seq
611 aa
AA seq
DB search
MLNPSARHLTAQACLQDVFGYNSFRGEQQEIVDHMVAGGDALVLMPTGGGKSLCYQLPAL
LRQGVGIVVSPLIALMQDQVDALQQLGVKAAFLNSSLNSEEFSKVTAALLRGELQVLYVA
PERLLIPNFLSLLEQVADHIGIALFAIDEAHCVSQWGHDFRPEYRKLTVLHERFPHVPRI
ALTATADAPTRAEIIERLALEDARQFISSFDRPNIKYRVLLKANARQQLESFIESEHPND
AGIIYCLSRRKVEETAERLKAKGWDALPYHAGLDADIRHAHQRRFLREEGVIMVATVAFG
MGIDKPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMTYGLGDVVNMKQMLENSDA
PAERQHVERQKLDALLGFCESTACRHQTILRYFGEQHPGDCGQCDNCLTPTDTWDGTQAA
QMALSCVYRTGQRFGVVHLIDVLLGKTSPKVTQFNHEQLSTFGIGKSLSQTQWSSVFRQL
VASGYLETDMDAFGGLRLTEAARPVLRSEVMVWLRQDQETPKRASKVERGARAKEAYAHV
ADDPLWHALKAKRTELAKEQGVPPYLIFHDSTLLEILNHRPTSLTEMGRISGIGQAKLTH
YGDAFLEVLEG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
ttgctaaacccatcagcacgccatttgactgcgcaagcctgcttgcaggacgtatttggt
tataattcctttcgcggtgagcaacaagaaattgttgatcacatggttgcaggcggtgac
gcactcgtactgatgccaacaggcggcggcaagtcactgtgttatcagctaccagcactg
ttgcgtcaaggcgttggcattgtggtatcaccgctcattgcccttatgcaagaccaagtg
gatgccctgcagcagcttggtgtaaaagccgcctttctcaactctagcttaaactcagaa
gaatttagcaaagtaactgccgcactgctgcgcggcgagttgcaagtgttgtacgttgcg
cctgagcgtttgctcatacccaactttctttccctgttggaacaggttgcagatcacatc
ggcattgcactctttgcaattgatgaggcgcattgcgtttcacaatgggggcacgacttc
aggccagaataccgcaagctcactgtactgcacgagcgctttccacatgtacccagaatc
gcgctaaccgctaccgcagatgcaccgactagggctgaaatcatagaacgtctagcgctg
gaagatgcacgccaatttatctctagttttgatcgccctaatattaaataccgcgtgcta
cttaaagccaacgcacggcagcagctagagtcttttattgagtctgaacatccgaatgat
gcaggcatcatctactgcttatcgcgccgtaaagtagaagaaactgccgaaaggctaaaa
gcaaagggctgggatgctctaccctaccatgctgggctggatgcagatatacgccacgcc
catcaaaggcgattcttacgcgaagaaggtgtgattatggtggccacggttgcatttggc
atgggtatagataaacctaacgtccgctttgtagcgcacctagacttacctaagagcatg
gaaggttattaccaggaaacaggccgtgccggcagagatggcctgccagccaatgcatgg
atgacgtatggcttaggcgatgtggtcaacatgaaacaaatgctggaaaacagcgacgcc
cctgctgaacgccagcatgtggagcgacaaaaactggatgctctgcttggtttctgcgag
tcaacggcatgtcgtcaccaaaccatattacgttactttggagaacagcatccaggtgat
tgcggacaatgcgacaactgcctcacgcctacagatacatgggatggcactcaggctgca
caaatggcattgtcgtgtgtatatcgcactgggcaaagatttggcgtagtgcatctgatt
gacgtacttcttggaaaaaccagtcccaaagttacacagtttaaccatgagcaattaagc
acttttggtataggcaaaagcctatcacagacgcaatggagcagcgtgttcaggcagtta
gttgcaagtggctacctagaaactgacatggatgcgtttggtgggctacgtctcaccgag
gctgcccgcccagtgctacgtagcgaagtaatggtatggctacgccaagatcaggaaaca
cctaaacgcgcaagcaaagttgaacgtggcgcgcgtgccaaagaggcttatgcacatgtg
gcggatgacccgttgtggcatgcactcaaagccaagcgtacggagctggcaaaagagcaa
ggtgtaccaccttacctaattttccacgatagcacactgctagaaattctaaatcatcgc
ccaaccagcttgaccgagatgggtaggattagtggtattggacaggccaaactcacacat
tacggtgatgcatttttagaggtattggaaggctag
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