Methylotenera mobilis: Mmol_1217
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Entry
Mmol_1217 CDS
T00942
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mmb
Methylotenera mobilis
Brite
KEGG Orthology (KO) [BR:
mmb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmb03019
]
Mmol_1217
Enzymes [BR:
mmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Mmol_1217
Messenger RNA biogenesis [BR:
mmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Mmol_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
HA2_N
nSTAND3
FtsK_SpoIIIE
T2SSE
NACHT
AAA_25
AAA_23
ResIII
PhoH
AAA_30
SLFN-g3_helicase
SRP54
RRS1
NTPase_1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACT48123
UniProt:
C6WW24
LinkDB
All DBs
Position
complement(1315235..1319320)
Genome browser
AA seq
1361 aa
AA seq
DB search
MIIKVEQHGMLKFAPMNVSKPDNLIPTNFEHALNSCMLADRHALRRKMQEIKTLQKLADE
RSLAKVQRMVNEVVQKMHTSQQKYQLRLAQLPKPEYPLDLPVSGKREEIATAISKHQVVI
VCGETGSGKTTQLPKICLELGRGVSGFIGHTQPRRIAARSVASRIAQELKTPLGEAVGYK
VRFNDKLSESSYVKLMTDGILLAETQGDKFLNAYDTIIIDEAHERSLNIDFLLGYLKQLL
PKRPDLKVIVTSATIDADRFSQHFNGAPVIEVSGRTFPVEIRYRPLGAAGFRAREVAEAE
NAQFDLDDDTIFGIARKAKTEARWLEEDDEEEAIEEAILDAADDLLRQGDGDILVFLPGE
REIRDVADHLRKYQGRSAKLKHIEVLPLFARLSIEDQQKIFRSHSSRRIVLATNVAETSL
TVPGIKYVIDAGLARVNRYSTRAKVEQLQIEKISQAAAKQRAGRCGRVSNGICVRLYSEQ
DFNGRPEFTEPEILRSSLAAVILRMAALRLGDVTEFPFIEAPSSRLIADGYLLLQELGAV
DARRQITDTGLQLAKLPLDPRVGRMILAAKREHCLREILIIASVLSIQDPRERPMDKREA
ADNAHAKFAGEGSDFMSYLKLWDFFDNALKTKKSNKDLLNQCHSNFLSFLRLKEWRELHG
QLLDIVLEMEFKLNEQEANFEQIHKALLAGLLGNIGFKDGDSDSYAGARGIRFHVAPGST
LKKTRPKWVMAAELVDTSKLYARGVAKIEPDWIEPLARGLTDSHYSDPRWDRKMGMVNAW
ERVSLYGLTIIPKRRVHYGPINAVESREIFIREALANGEFDTKAAFFSANERLIAEVEEL
EHKARRQDVLVDEHKLFAFYDAKIPADIFNAASFEKWRTDAEKVSPRLLYLTRDDLMRHG
ADAITAVQFPEKVMLDGVETNLKYRFEPGHVLDGVTATVPLALLNQLNPVQTEWLVPGML
REKITYLIKALPKTFRRVCVPVPEFVTGFLDDVNEQFSQPMLDALASYIQRKTTLKISKE
DWDLSDIPPHHLMNFSVLDDSGRELAMGRDWNALKKQLGSAAQLTFRNTSPDIEKTGLKQ
WDFGDLPQTLSFERDGLKVTGYPALEDAHDSIAVKLFDTEREAALSHRRGVCRLMRFELK
EQMKQLEKSLPNFNQYALVLRNVMQADDLREDMILAIADRAFIGEDELPRTNAEFMVLKQ
RARTRLPAVTQAVARQAQAIATEYQLLVQKQGQMGAAANRLKRDLEQQIGLLVYKGCFHQ
TPWEQLQHIPRYLKALRLRIEKHPANPDRDGKNAASVGLVWQKWQDKVSALHAAHLDIPQ
HLQDFRWLIEELRVSLFAQELKTPFPVSLKRLEKTWADMRF
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgattattaaagtagaacagcatggcatgttaaaatttgcgcctatgaacgtgagtaaa
cctgataatttaattcccactaactttgaacacgccctaaatagctgcatgctggctgat
aggcatgcattacgccgcaaaatgcaagagatcaaaacactgcaaaaacttgcagatgaa
aggtcattagccaaggtgcagcgcatggtgaatgaagtagtgcaaaaaatgcacacttca
cagcaaaagtaccaattgcgtttagcacaactgcctaagccagaatatccgttagatttg
cctgtaagcggaaaacgggaggaaatcgccaccgccatcagcaaacaccaagtggtgatt
gtatgcggcgaaaccggatcaggtaaaaccacacagttacccaagatttgtttagagcta
gggcgcggcgtttctgggtttatcggtcatacccagccgcggcgtattgctgcaagatcg
gtcgctagccgcatcgcccaagagcttaaaacgccgttaggcgaagcggtgggctacaag
gttaggtttaacgataagctatctgaatccagctacgtgaagctgatgactgatggtatt
ttgctggcggaaacccagggcgataagtttctcaacgcttacgacactatcattattgat
gaggcgcacgaacgtagtctcaacatcgactttctgctgggttacctcaaacagctgtta
cctaaacgccctgatttaaaagtgattgtcacctcagctaccattgatgctgatcgcttt
tcacagcactttaatggcgcccccgtgattgaagtttccgggcgtaccttcccggtagag
attcgctatcgtcctttgggcgcagctggcttccgtgcgcgtgaagtggctgaagcagag
aacgcacaatttgatctggatgatgacactatttttggcattgcacgcaaagccaaaaca
gaagcacgctggctggaagaagatgatgaagaagaggcgattgaagaggctattttagat
gcggccgatgatttattacgccaaggtgatggcgatattctggtgtttttacccggcgag
cgtgagatccgtgatgtagcagaccatttgcgcaaatatcaaggccgctccgccaagctt
aagcatatagaagtactgccgctgtttgcccgtttaagtattgaagatcagcagaagata
tttagaagccatagcagcagacgcattgtgctggcaaccaatgtggccgaaacctcgctc
accgtgcctggcattaaatacgtgattgatgcaggtttagcgcgggtgaaccgctatagt
acccgcgccaaggttgagcaactgcaaattgagaagattagccaggcagctgccaagcag
cgagcagggcgctgcggccgggtttcaaatggtatctgtgtgcgtctatattctgagcaa
gattttaatggtcgaccagagtttactgagccggaaatcttacgtagctcgttagccgcg
gtcattttacgcatggccgcactgcgtttgggtgatgttaccgagtttccgtttatcgag
gcaccttcatcacgtttaatcgctgatggttacctgttattacaagagctgggcgcggta
gatgcacgtcgccaaattaccgatactggcttgcaattagccaaactgccgttagacccg
cgtgtggggcgcatgatacttgccgccaagcgtgagcattgcttaagagaaatattgatt
attgccagtgtgctcagcatacaagacccacgtgaacgtcccatggataagcgtgaagcc
gccgataatgcacatgccaagtttgcaggtgaaggctcagattttatgagctatctcaag
ctgtgggatttcttcgataatgcgcttaaaactaaaaaatctaataaagacttacttaac
cagtgccatagcaactttttatcattcttacgtttgaaggaatggcgtgagttacacggg
cagttgctagatatcgttttagagatggaatttaagctgaatgaacaagaagcgaacttt
gagcaaatccataaagcgctactggctgggttattaggcaatattggttttaaagatggt
gatagtgattcttacgcgggtgcacgcggtatccgcttccatgtggcgccaggctctaca
cttaagaaaactcgtccaaaatgggtgatggcagccgagttggtcgatacttctaaactg
tacgcacgtggtgtggctaagattgagccagactggatagaaccgcttgccagaggcctc
accgacagccattattcagacccgcgctgggatagaaaaatgggtatggttaacgcttgg
gagcgtgtgagcctgtatggcctgaccattatccccaagcgtcgtgtgcactatggcccg
attaacgcggtagagtcccgtgagatatttatccgcgaagcattggccaatggcgagttt
gataccaaagcggccttttttagcgcgaatgagcgcttgattgccgaggttgaagagctg
gaacataaagcgcgccgccaagacgtattggtggatgagcataaactttttgctttttat
gatgccaaaatacctgctgatatttttaatgccgccagttttgaaaagtggcgcaccgat
gcggaaaaagtatcgccaaggctgttgtatctgacgcgtgatgacttaatgcgccatggt
gcagatgccattaccgcagtgcagtttcctgagaaagtcatgttagatggggttgaaacc
aatttgaagtatcgttttgagccggggcacgtgctggacggcgtgaccgccacggtaccg
cttgccttgttgaatcagttaaacccagtgcaaaccgaatggctagtgccgggcatgctg
cgcgagaaaatcacctatttgattaaagcgttgcctaaaacattcaggcgagtgtgtgtt
cctgtgccagagttcgttaccggctttttagatgatgtgaacgagcaattttctcagccc
atgctagacgcattagcttcatacatacagcgtaaaaccacgcttaaaattagtaaagaa
gattgggacctgagcgatataccgccgcaccatctaatgaacttcagcgtgctggatgat
agcggtagggaactggccatggggcgtgactggaatgccctgaaaaaacaactggggtcg
gctgcacagcttacttttagaaacacttcgccagatattgaaaaaacgggtttaaaacaa
tgggactttggcgacttaccacaaacgcttagtttcgaacgtgatggcctcaaagtcaca
ggctatccagcactggaagatgcgcatgacagtatcgccgtgaagctgtttgatacggag
cgtgaggctgcgcttagccatcgtagaggtgtgtgccgtttgatgcgattcgaattaaaa
gagcagatgaaacagttggaaaaaagtctgccaaactttaatcaatacgcgctagtttta
cgtaatgtgatgcaggccgatgatttgcgtgaggacatgattctagcaatcgcagaccgt
gcctttattggtgaagatgagttgccgcgcaccaatgccgagtttatggtgctaaaacaa
cgcgccagaacacgcttgcctgccgtaacgcaagcagtagcgcggcaagcacaggctatt
gccactgagtaccagttgttggtgcagaagcaaggtcaaatgggcgccgcagccaatagg
ttaaagcgtgatttagagcagcaaattggtttgttagtatataagggttgttttcaccaa
acaccttgggagcaattgcagcatattccgcgctatttaaaggcactcagattgcgtatt
gagaagcacccggctaacccagaccgtgatggtaaaaatgctgcaagtgtgggcttggtt
tggcagaagtggcaggataaggtgagcgctttgcatgccgcacatttagacatcccgcag
cacttgcaggattttagatggttaattgaagagctacgagtgtctttgtttgcgcaagaa
cttaaaacaccgtttcccgtatcgcttaagcgtctggaaaaaacttgggcagatatgcgc
ttttaa
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