Methylotenera mobilis: Mmol_1279
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Entry
Mmol_1279 CDS
T00942
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mmb
Methylotenera mobilis
Pathway
mmb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmol_1279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmb03019
]
Mmol_1279
Enzymes [BR:
mmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mmol_1279
Messenger RNA biogenesis [BR:
mmb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmol_1279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SNF2-rel_dom
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACT48185
UniProt:
C6WW86
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All DBs
Position
1390838..1392217
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AA seq
459 aa
AA seq
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MTDIVTTDSPSFSTLGLAPELLRALTESGYTTPTPIQAQAIPVALAGGDLMAGAQTGTGK
TAAFSLPLLQKLLPLANNSTSPAKHPVRALILTPTRELAIQVEESVKAYAKHTQLRSLVV
YGGVDIKTQTPHLKTGVEVLVATPGRLLDHIEQKTLQLNQVQMLVLDEADRMLDMGFMPD
LKRILALLPKQRQNLMFSATFSNEIKKLADDFLTKPQLIEVARSNATNDNVTQKVYQVAQ
SDKEALLIQLLREADAKQVIVFTKTKLTASRLSRSLVREGIAADAIHGDKNQQERIKALD
AFKAGTVSALIATDVAARGLDISELPMVINYEIPSAPEDYVHRIGRTGRAGALGVAISFV
SDDEEKYLVEIEKLIKRQITKETVTLDRPSARVRSHASSHKEAAAPVAKRMPAKKKSADP
WFDKPYEPNAQRGKSTTGNKAVITKKAPVAALLGGLSRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatcgtaacaactgacagcccaagtttcagcacattaggactcgcacccgag
cttctacgtgcattaactgaatctggttacactaccccaaccccaattcaggcacaggca
attcctgttgccttagctggcggggatttgatggcaggtgcacaaacaggcacaggtaaa
actgcagctttttcactgcccctgctacagaagttactaccgctagccaacaacagcact
tctcctgctaagcacccggtgcgcgcgttgattttgacgcctacacgtgagcttgcgatt
caagtggaagaaagcgtgaaagcctatgccaagcatacgcaattgcgctctctggtggtt
tatggcggcgtagatatcaaaacacagacgcctcaccttaaaaccggggtagaagtattg
gtagcgacgcctggccgtttgttggatcatattgaacaaaaaacgctgcaactcaaccaa
gtacagatgttagtgcttgatgaagcagacagaatgctagacatgggctttatgcctgat
ttaaagagaattttggctttactgccaaaacagcgtcagaacttaatgttctcagcaaca
ttctccaacgaaattaaaaagttagcagatgactttttaacaaaaccgcagttgattgaa
gtggcacgcagcaatgctaccaatgacaatgtaacgcaaaaagtgtatcaagttgcacaa
tcagacaaagaggctttgttaattcagctgttaagagaagccgatgcaaaacaagtcatc
gtattcaccaaaaccaaattaacggccagccgtttaagccgcagcctagtacgtgaaggc
attgccgcagacgcgattcatggtgataaaaaccagcaagaacgcattaaagcgctggat
gcttttaaagctggtacggtttcagcgctgatcgcaacagacgttgccgcacgtggttta
gatattagtgagttaccaatggtaattaactatgaaatcccaagcgcgccagaagactat
gtacaccgtattggccgtaccggacgtgccggtgcgttaggtgttgccatctcatttgtc
agcgatgatgaagaaaaatacctggtagagattgaaaagctaatcaagcgccaaattact
aaagaaaccgtcactttggacagaccaagcgcacgtgtacgcagccacgccagcagccat
aaagaggcagcagcaccggtagctaaacgcatgccagctaagaagaaaagcgcagaccca
tggtttgataagccttatgagccaaacgcgcagcgcggcaaaagcactaccggcaataaa
gcagttatcactaagaaagcccctgttgcggccctgcttggtggcttatccagaaaataa
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