Mycobacterium sp. MCS: Mmcs_0901
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Entry
Mmcs_0901 CDS
T00367
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mmc
Mycobacterium sp. MCS
Pathway
mmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mmcs_0901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmc03400
]
Mmcs_0901
Enzymes [BR:
mmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mmcs_0901
DNA repair and recombination proteins [BR:
mmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mmcs_0901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABG07017
UniProt:
A0A5Q5BFQ8
LinkDB
All DBs
Position
complement(998731..1001979)
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AA seq
1082 aa
AA seq
DB search
MPFHLHRAERTDLLADGLGALLSTPLADPFAEELVLVPAKGVERWLSQRLSHVLGRGSGD
DGVCAGITFRNPRSLIADITGTRDDDPWAPDSLVWPLLEVIDDNLDQPWCTTLATHLGHF
EHGQEQELRQSRRYAVARRLAGLFASYARQRPGLLVDWLAGNPADLDDDLHWQPHLWRHL
VERVPADPPHIRHAKTVARLHESPSNLPERMSLFGHTRLPSTEVELLDALATHHDLHLWL
PHPSDDLWTTLEPHRGAVRRREDNTHREVGHPLLATLGRDLRELQRSLPDDSQTDEYLGT
ADHPDTLLGWLQSDIAANAVRPDGRRLHDHDRSVQVHSCHGAARQIDVLREVLLGLLVDD
PTLEPRDILVMCPDIEHYAALIVAGFGLGDVIHGAHPAHRLRVKLADRALTQTNPLLGVA
GQLLALAGGRATATEVLNLAEAPSIRARFTFSDDDLDAIGDWVREANIRWGFDREHRHPY
GVDFVQNTWRFGLDRVLAGVAMSDDSHAWLDTTLPLDDVGSDRVELAGRLAEYVDRLQHC
VENLSGTKPLHEWLEALRTGIDQLTAVPDDDTWQTSQLEREFADVLTQAGSRKDTLLRLP
DVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGAFPRLGVVDGDD
ALARDPMTGERDIRSEDRQLLLDAIGAATERLVVTYTGANEYSGQRKPPAVPLVELLDAL
DVTTEAPVRKQILVEHPLQPFDVRNVTPGALGVPGTPFTFDSTALTAATVASGDRAERPG
LLTHPLPAPPEDDVALDDLIGFFKDPVKGFFRALDFTLPWDVDAVQDAMPVEIDALAEWQ
VGERMLDDMLRGLNPEQAQQAEWRRGSLPPGRLGWRKAQELRDQAAALATAAHRHRRQPA
RAYDVDIHLGGGRRVTGTVPKVYGDRTVTVTYSKLDGRHLLASWIQLAALTAQLPGTDWA
AVCIGRPKRGATPRERMLGAPGDATGVLRDLVNMYDAGRREPIPLPPKTSYAWAEARHSR
GDAERESRYRWKSDRYPGEDAEPANVRVWGAHAPLDTLLAAGMDGYAGRLWLPMLEAERD
PD
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgccattccatctgcaccgggcggagcgcaccgacctcctggccgacggactcggtgcc
ctgctgtccactcccctggccgacccgttcgccgaggaactcgtgctcgtcccggcgaag
ggcgtcgagcggtggctgagccagcggctctcgcacgtcctcggccgcggttccggcgac
gacggggtctgcgcgggcatcacattccgcaatccgcggtccctcatcgccgacattacc
ggtacccgggacgacgacccctgggcccccgactcgctggtctggccgctgctcgaggtc
atcgacgacaacctcgaccaaccgtggtgcaccacgctcgccacccacctcggccacttc
gaacacggccaggagcaggaactccgccagagccgccgctacgccgtcgcccgccgcctc
gccggcctgttcgcctcctacgcccgccagcgccccggactgctcgtcgactggctcgcc
ggcaaccccgcagacctcgacgacgacctgcactggcagccgcatctctggcgacacctc
gtcgagcgggtgcccgccgacccgccgcacatccggcacgccaaaaccgttgcccgcctg
catgaatcacccagcaacctgcccgaacgcatgtcgctgttcggccacacccggctgccc
tccaccgaggtcgaactgctcgacgcgctcgccacccaccacgatctgcacctgtggctg
ccgcaccccagcgacgacctgtggaccaccctcgaaccccaccgcggcgccgtgcgccgc
cgcgaggacaacacccaccgcgaggtcggccacccgctgctcgccaccctcggccgcgac
ctgcgcgaactgcagcgcagcctgcccgacgattcgcagaccgacgagtatctgggcacc
gccgaccatcccgacaccctgctcggctggttgcagtccgacatcgccgccaacgcggtc
cgccccgacggccgccgactgcacgaccacgaccgctcggtccaggtgcacagctgtcac
ggcgccgcccgccagatcgacgtcctgcgcgaggtgctgctcggcctgctcgtcgacgac
ccgacgctcgaaccccgcgacatcctcgtcatgtgcccggacatcgagcactacgcagcg
ctgatcgtcgccggcttcggcctcggcgacgtgatccacggtgcgcacccagcgcatcgg
ttgcgcgtcaaactcgccgaccgcgcactcacccagaccaacccgttgctcggcgtcgcc
ggtcaactcctcgcgctcgcgggcggccgcgccaccgccaccgaggtgctcaacctcgcc
gaggccccgtcgatccgggcgcggttcaccttcagcgacgacgacctcgacgcgatcggt
gactgggtacgcgaggccaacatccggtggggtttcgaccgcgagcaccgccacccctac
ggcgttgacttcgtccagaacacctggcgtttcggactcgaccgggtgctcgccggcgtc
gcgatgtccgacgactcgcacgcctggctcgacaccacgctgcccctcgacgatgtcggc
agcgaccgcgtcgaactcgccggccgcctcgcggaatacgtcgaccgactgcagcattgc
gtcgaaaacctcagcggcacaaagccactccacgaatggctcgaagcgctgcgcaccggt
atcgaccagctgaccgcggtccccgacgacgacacctggcagaccagccagctggagcgc
gagttcgccgacgtcctcacccaggccggctcccgcaaggacaccctgctgcgcctaccc
gacgtcaaggccctgctcgaccgccacctcgccggacggcccacccgggccaacttccgc
accggcacgctcaccgtgtgcacgatggtgccgatgcgctcggtcccgcaccgggtggtg
tgcctggtgggtctcgacgacggggcgttcccgcgcctgggcgtggtcgacggcgacgac
gcactggcccgcgacccgatgaccggtgaacgcgacatccgctcggaggaccgccaactg
ctgctcgacgcgatcggcgcggcgacggagaggctggtcgtcacctacaccggcgccaac
gagtactccgggcagcgcaaacctccggcggtgccgctggtcgaactgctcgacgcgctc
gacgtcaccaccgaggccccggtgcgcaagcagatcctcgtcgaacatccgttgcagccc
ttcgacgttcgcaacgtcactccgggcgcgctaggggtgcccggcacaccgttcacgttc
gactcgacggcgctgaccgccgcgaccgtcgcgtccggggaccgcgccgagcggccgggt
ctgctcacccatccgctgcctgcgccaccggaggacgacgtcgcgctcgacgatctgatc
ggcttcttcaaggatccggtcaaggggttcttccgggcgctggacttcacgctgccgtgg
gacgtcgacgccgtccaggacgccatgccggtggagatcgacgcgctggccgaatggcag
gtcggcgaacggatgctcgacgacatgctgcgcggcctcaatcccgaacaggcgcaacag
gcggagtggcggcgcgggtcgctgccacccggccggctcggctggcgcaaggcgcaggag
ttgcgcgatcaggccgccgcgctggccaccgcggcgcaccggcaccgacggcaaccggcc
cgggcgtatgacgtcgacatccacctcggtggcggccggcgcgtcaccggcacggtcccg
aaggtgtacggcgaccgcacggtcaccgtcacgtactccaaactcgacggccgccacctg
ctggcgtcgtggatccagttggcggcgttgaccgctcaacttcccggtacggactgggcg
gcggtgtgtatcggccggccgaagcgtggcgccaccccgcgggaacggatgctcggcgcg
cccggggatgccaccggtgtgctgcgcgatctggtgaacatgtacgacgcggggcgccgt
gagccgataccgctgccgccgaagacgtcctatgcgtgggccgaggcgcgtcacagtcgt
ggagacgcggagcgcgagtcgcgataccgctggaagtcggaccgctacccgggtgaggac
gccgaaccggccaacgtacgggtgtggggggcgcacgccccgctggacaccctgctcgcg
gcgggcatggacggctacgccggacgcctgtggctgccgatgctggaagccgagagggac
cccgactga
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