Mycobacterium sp. MCS: Mmcs_0970
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Entry
Mmcs_0970 CDS
T00367
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mmc
Mycobacterium sp. MCS
Pathway
mmc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mmcs_0970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmc03021
]
Mmcs_0970
03400 DNA repair and recombination proteins [BR:
mmc03400
]
Mmcs_0970
Enzymes [BR:
mmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mmcs_0970
Transcription machinery [BR:
mmc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mmcs_0970
DNA repair and recombination proteins [BR:
mmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mmcs_0970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ABG07085
UniProt:
Q1BDE9
LinkDB
All DBs
Position
1075505..1079452
Genome browser
AA seq
1315 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITDVNDEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDEVL
YRELVDRYGEYFTGAMGAESIKKLIENFDIEAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQTNRNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGKPLAMPRLDMVTGLYFLTTMIEGDKGEYR
PAATDQPEEGVYSSPAEAIMAMDRGALSVRAKIKVRLTQLRPPAALEAELFENGWKPGLA
WTAETTLGRVMFNELLPISYPFINEQMHKKVQARIINDLAERFPMIVVAQTVDKLKDAGF
HWATRSGVTVSMADVLVPPQKQEILDRYEAEADGIERKYQRGALNHKERNDSLVKIWQDA
TEEVGKALEEHYPADNPIITIVKSGATGNFTQTRTLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCETERGINVTL
AERQPDGSLIRDPHVETSAFARTLATDAVDADGNVVIERGHDLGDPAIDKLLAAGIDHVK
VRSVLTCASATGVCAMCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVG
EDITGGLPRVQELFEARVPRNKAPIADVSGRVQLEEGERFYKITIVPDDGGEEVVYDKLS
KRQRLRVIKHEDGSEGVLSDGDHVEVGDQLMEGSADPHEVLRVQGPREVQIHLVHEVQEV
YRAQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERAEFESENRRVVAEGGEPA
AGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLQGLKENVIIGKLIPAG
TGINRYRNIQVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgagctccggatcggcctcgccaccgccgacgacatt
cgtcagtggtcctacggtgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggagaaggatggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgtcgtgagcggatgggccacatcgagctggccgcaccc
gtcacgcacatctggtacttcaagggtgtgccgtcgcggttgggctacctgctcgacctg
gccccgaaggatctcgagaagatcatctacttcgcggcctacgtcatcaccgacgtcaac
gacgagatgcgccacaacgagctctcgaccctcgaggccgagatggtcgtcgagaagaag
gccgtcgaggatcagcgcgacgccgacctggaggcccgcgcccagaagctcgaggccgac
ctggccgagctcgaggccgaaggcgccaagagcgacgtgcgccgcaaggtgcgcgacggc
ggcgagcgggagatgcgtcagctccgcgaccgggcccagcgtgagctggaccggctcgac
gagatctggaccaccttcaccaagctggctcccaagcagctcatcgtcgacgaggtgctc
taccgcgagctcgtcgaccgttacggcgagtacttcaccggtgccatgggcgcggagtcg
atcaagaagctcatcgagaacttcgacatcgaggccgaggccgagaacctgcgcgagacc
atccgcagcggcaagggtcagaagaagctgcgcgcgctcaagcgactgaaggtcgtcgcg
gcgttccagacgaatcgcaactcgcccatgggcatggtgctcgacgccgttccggtgatc
ccgccggagctgcgcccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccggttgaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcgcatgctccaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccggcccgtcaccgggcccggtaaccgtccgctcaag
tcgctgtccgatctgctcaagggcaagcagggccggttccgtcagaacctgctcggtaag
cgcgtcgactactcgggccgttcggtcatcgttgtgggtccccagctgaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagagcgccaagcgcatggtggaacgtcagcgt
ccgcaggtgtgggacgtgctcgaagaggtcatcgccgagcacccggttctgctgaaccgc
gcacccacgctgcaccgcctcggtatccaggccttcgagccgcagctggtcgagggtaag
gccatccagctgcacccgctggtctgcgaggcgttcaacgccgacttcgacggcgaccag
atggccgtgcaccttccgctgagtgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgcccgcgtcgggtaagccgctggccatgccgcgtctggac
atggtcaccgggctgtacttcctgaccacgatgatcgagggcgacaagggcgagtaccgt
cccgccgccacggatcagccggaggagggcgtgtacagctcgcccgccgaggcgatcatg
gcgatggaccgcggtgcgctgagcgtgcgcgcgaagatcaaggtgcggctgacccagctg
cggccgccggccgccctggaggccgagctgttcgagaacgggtggaagccgggcctggcc
tggaccgccgagacgacgctcggtcgcgtgatgttcaacgagctgctgccgatctcgtat
ccgttcatcaacgagcagatgcacaagaaggtgcaggcccggatcatcaacgatctggcc
gagcgcttcccgatgatcgtcgtcgcacagaccgtcgacaagctcaaggacgccggtttc
cactgggccacccgttcgggtgtcacggtctcgatggccgacgtgctcgtgccgccgcag
aagcaggagatcctcgaccgctacgaggcggaagccgacgggatcgagcgcaagtaccag
cgtggcgccctgaaccacaaggagcgcaacgactcgctggtcaagatctggcaggacgcc
accgaagaggtcggtaaggccctggaggagcactacccggcggacaacccgatcatcacg
atcgtgaagtcgggcgccacgggtaacttcacgcagaccagaacgctggccggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcggccgatcaagtcctcgttccgc
gagggcctgacggtgctggagtacttcatcaacacccacggcgcccgtaagggtctggcg
gacacggcacttcgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtttcg
caggacgtgatcgtccgcgagcacgactgcgagaccgagcgtggcatcaacgtcacgctg
gccgagcgtcagcccgacggcagcctgatccgcgatccgcacgtcgagacctcggcgttc
gcccgcaccctggccaccgacgcggtcgacgccgacggcaacgtcgtcatcgagcgtgga
cacgacctgggcgacccggccatcgacaagctgctggcggccggcatcgaccacgtcaag
gtgcgttcggtgctgacctgtgcgtcggccaccggcgtgtgcgccatgtgctacggccgt
tcgatggcgaccggcaagctggtcgacatcggcgaggccgtcggcatcgtggccgcgcag
tccatcggtgagcccggcacgcagctgaccatgcgcaccttccaccagggcggtgtgggt
gaggacatcaccggcggtctgccccgcgtgcaggagctcttcgaggcccgcgtgccgcgg
aacaaggcgccgatcgccgacgtctccggccgtgtgcagctcgaggagggtgagcgcttc
tacaagatcaccatcgtcccggacgacggtggcgaggaagtggtctacgacaagctctcc
aagcgtcagcgcctgcgtgtgatcaagcacgaggacggctccgagggcgtgctctccgac
ggcgaccacgtcgaggtcggcgaccagctcatggagggttcggccgatccgcacgaggtc
ctgcgtgtgcagggtccgcgtgaggtgcagatccacctggtccacgaggtccaggaggtc
taccgggcccagggcgtgtcgatccacgacaagcacatcgaggtcatcgtccggcagatg
ctgcgtcgcgtcacgatcatcgattcgggtgcgacggagttcctgcccggctcgctgacc
gagcgtgcggagttcgagtcggagaaccgtcgcgtcgtcgcggaaggtggcgagcccgcc
gccggccgtccggtgctgatgggtatcacgaaggcatcgctggccaccgattcgtggctg
tcggcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatcaactgccgc
agcgacaagctgcagggtctgaaggagaacgtgatcatcggcaagctgatcccggccggt
accggtatcaaccgctaccgcaacatccaggtgcagccgaccgaagaggcccgcgctgcg
gcgtacacgatcccgtcctacgaggatcagtactacagcccggacttcggccaggcgacc
ggcgctgcggtgccgctggacgattacgggtacagcgactaccgctag
DBGET
integrated database retrieval system
