Mycobacterium sp. MCS: Mmcs_1279
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Entry
Mmcs_1279 CDS
T00367
Name
(GenBank) conserved hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mmc
Mycobacterium sp. MCS
Brite
KEGG Orthology (KO) [BR:
mmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmc03032
]
Mmcs_1279
03400 DNA repair and recombination proteins [BR:
mmc03400
]
Mmcs_1279
Enzymes [BR:
mmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mmcs_1279
DNA replication proteins [BR:
mmc03032
]
Prokaryotic type
DNA Topoisomerases
Mmcs_1279
DNA repair and recombination proteins [BR:
mmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mmcs_1279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABG07391
UniProt:
A0A5Q5BGP9
LinkDB
All DBs
Position
complement(1386918..1387937)
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AA seq
339 aa
AA seq
DB search
MRLRRSVVSGPGLTRVRRGKGFSYRDANGDAVTDKKTIDRINSLVIPPAWKKVWICPYPN
GHIQAVGTDAAGRRQYLYHQKWQEERNEEKFDRVLQMSSALPEMRRQIAADLGGRGWQRN
RVLALALHLLDLGYFRAGGDQYAEENNSFGIATLLCEHVKLQRQAVEFDYPAKSGVQRSL
VIDDPEVVKSVRALLRHPDRPDRLLACRNGDGWAEIRSDDLNTRFKELVGEDYSVKDLRT
WHGTVLAAVAFVDADPPVNKTVIKRVESAVMKEVSGSLGNTPAVARTSYVDPRVVSAYES
GATIAAAERRALRAKRPDERQLIRERATAKLIRRAAKSR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttcggcgcagcgtagtcagcggccccggcctgacccgggtgcgccgcggcaag
ggcttctcgtaccgcgatgcgaacggcgacgccgtcaccgacaagaagacgatcgaccgc
atcaactccctggtgatcccgccggcatggaagaaggtgtggatctgcccgtaccccaac
gggcacatccaggccgtcggcaccgacgccgccggacggcgtcagtacctctaccaccag
aagtggcaggaggaacgcaacgaggagaagttcgaccgggtgctgcagatgtcgtccgca
ctgcccgagatgcgtcggcagatcgccgcggatctgggcggccggggctggcagcgcaac
cgggtgctggcgctggcgctgcacctgctcgatctcggctacttccgcgccggcggcgat
cagtacgccgaggagaacaactcgttcggcatcgcgacgctgctgtgcgaacacgtcaag
ctgcagcgccaggccgtggagttcgactatcccgccaagagcggtgtccagcgcagcctg
gtgatcgacgatcctgaggtggtgaagtcggtgcgggcgctgctgcgccatccggatcga
ccggaccgcctgctggcgtgccgaaatggcgacgggtgggccgagatccgctccgatgac
ctcaacacccggttcaaggagttggtgggcgaggactactcggtgaaggatctgcgcacc
tggcacggcaccgtactggcggccgtcgcgttcgtcgatgccgacccgccggtcaacaag
acggtgatcaaacgcgtggagtccgcggtgatgaaagaggtgtcaggttcgctcggcaac
acccccgcggtggcgcggacctcctatgtggacccgcgggtggtcagcgcctacgaatcg
ggggcaaccatcgccgccgccgaacgccgggcactacgtgccaaacgtcccgacgaacgt
cagctgatccgcgagcgggccaccgcgaagctgatccggcgggccgccaaaagtcggtag
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