Mycobacterium sp. MCS: Mmcs_1430
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Entry
Mmcs_1430 CDS
T00367
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein
Organism
mmc
Mycobacterium sp. MCS
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
UvrD_C_2
TraI_hel_assoc_N
Viral_helicase1
DEAD
Helicase_RecD
PIF1
Motif
Other DBs
NCBI-ProteinID:
ABG07542
UniProt:
A0A5Q5BH56
LinkDB
All DBs
Position
complement(1553403..1557974)
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AA seq
1523 aa
AA seq
DB search
MHVMVMTLHKLTAGDGYVYLVRQVAAADSTERGRSPLADYYSAKGESPGRWTGRGLAALA
DTGAREVSDEVRQQMWTVEGGSVVTEEQMKALFGLGLHPNADRISDHLSPRLNVRPSIAA
TQLGRKYAVRDESSEFTRRVGKAFRAHNIAAGLPGAATIDDDVRAGIRTRVATEMFAEQF
DRAPADARELSGFIARATRARTTAVAGYDLTFSPVKSISALWAIAPPEVSEQIEAAHEAA
VAEVLEWLQDNAAFTRTGTNGVAQVDTQGLIAAVFTHRDSRAGDPDLHTHVAISNKVSYL
DHNGVRRWLALDGQPLHRVIVAASEMYNTRMEAHTIDRLGVDFAETSRGRGKRTVREIVG
MSTELMTRWSSRRTAIKARTAELAKAFQHDHGREPTTIESLALAQQATLESREAKHEPRS
LAEQRDTWRHQAVEVLGHDGVDRMLANVLTPERGHTTPEITDEWVAAQAGALIATVSESR
ATWQRHHVHAEALRVVRNEGVARVSQLVERLTDTALSEAFSVPHARTADAELGEPVALRR
SDGSSVYSRHGTATYTSRDILTAERRILAAAHQLDGRVAAATDVRLALADAAAHGKNLND
GQAALVAQMALGGRRVGLALAPAGAGKTTAMAALAHAWRSSGGQVLGLAPTAAAAIVLGE
DLGATTDTLEKYVHCTDENNAAIYGTPDWFTQVGPDTLIVVDEAGMASTPGLDALITHAL
SAGASVRLVGDDAQLASISAGGVLRDIATDTGALTLSEVVRFHSRAEAAASLALRGGDPA
GIGFYLDAGRIHIGTEQTSADAAFTAWQADQDAGRDSLLLAPTNAIVNELNVRARTARLA
AALEADPQATPGRETTLSDGLTASVGDVIRTRRNNRQLPLSGTDYVRNGYTFTIVDIATD
GALTARHRGTGREITLPTDYVTDHVTLGYATTIDAAQGSTAGHACHVVGAEHLTRQHLYV
ALTRGRAENHLYLSTAETDPHRILAPKATHPDTAVDVLSRIVARDGAQVSATTAARQAAD
PSRRLAAAANMFTDALATAAENQLGEGARARLDALAESVHPDLTTCTAWPVLRRSLAMRA
LSGADPGRLLTAAYARGGLDDAADAAAVLDYRIDLTDGDGRGSGPLRWLPAIPTVLADNP
HWGDYLHRREHLVTDLADQIRDHARSWTTEIAPPWARPLIAANANPTLTAEIAVFRAATA
VTAADTRLTGSPQYPVATRAVQDLLQRHGIDAIAHSRPDTTQWHDLIDAIDPRVRADEYW
PTLAAQLAEAAPTNNIPQLLADAAHQGPLPDEMPAAALWWRITETLAPTAAVPEPQESVE
HASDAALVEVLAAAHRNGDPLRLPAPQPDPVAPALTAPYVVTTLAADHDTPELAEAIAAA
AADAGRSYLRVPATPQSDRYSLAELADKITDRRPPRAALVVVEDAAAADPAQLATVATAL
ADAHGRLLLIDNGEPGPGRRLLDGMGLPWSENSRPTITIEDTALADSADNHRAAAAKRWR
TLTNRHGRDRGRDRDQQYGLDID
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtcatggtgatgacgctgcataagctgaccgccggggacggatacgtgtacctg
gtgcggcaagtcgcggccgccgacagcaccgaacgcggtcgctcccccttggccgactac
tactcggccaagggcgaatcaccgggccgttggactggtcgcggcctggccgcgttggcc
gacaccggcgcgcgtgaggtcagcgacgaggtgcgccaacagatgtggaccgtcgaaggc
ggatcggtggtcaccgaggagcaaatgaaggccctgtttgggctgggtttgcaccccaac
gccgacaggatttctgaccatctgtccccgcgactaaatgttcgcccttcgattgcggcc
acccagttgggccgcaaatacgcggtgcgtgacgagtcctcggagttcacccgtcgtgtc
gggaaagcgttccgcgcgcacaacatcgccgccgggctaccgggcgcggcgaccatcgat
gatgacgtgcgcgcaggcatccgcacccgcgtcgccaccgagatgttcgccgagcaattc
gaccgcgcaccagccgatgcgcgggagctgtccgggttcatcgcacgcgccacccgtgcc
cgcaccacagcggtggccggctacgacttgacgttctctccggtgaagtcgatttcggcg
ttgtgggcaattgccccgcccgaggtttccgagcagatcgaggccgcgcacgaggccgcg
gtggctgaggtgttggagtggctgcaagacaacgccgccttcactcgaacgggcaccaac
ggtgtcgcccaggtcgacacccaagggctcattgccgcggtgttcacccatcgcgattcg
cgtgccggggaccccgatctgcacacccatgtcgcgatctccaacaaggtgtcttacctc
gatcacaatggggtgcgccgctggctcgctttggatggccaacccctgcaccgggtcatc
gtggcggcctcggagatgtacaacacccgcatggaagcccacaccatcgaccgcctcggt
gtggacttcgccgagacctcccggggacgcgggaaacgaaccgtgcgcgagatcgtcggc
atgtctacggaattgatgacgcgctggtcgagccggcgcacggcgatcaaggcccgcacc
gccgagttggccaaggcgtttcagcacgatcacggccgcgaaccgaccaccatcgagtcc
ctcgcgttggcccaacaagcgacgttggaatcgcgcgaagccaagcacgaaccgcgctcg
ctggccgaacagcgcgacacctggcgccaccaagccgtcgaggtcctgggccacgacgga
gtagaccgcatgctagccaacgttctgaccccagaacgcggccacacgacaccggagatc
accgacgaatgggtggcggcgcaggctggcgcactgattgccacagtgtccgaatcgcgc
gcgacctggcagcgtcatcacgtgcacgccgaagccctccgcgtcgtgcgtaacgagggt
gtcgcacgcgtgtcgcagcttgtcgaacggctcaccgacaccgcactttcggaggcgttc
tcggtgccgcacgcccgcaccgcggacgccgagttgggcgagcctgtcgcattgcgtcgc
agcgacggttccagcgtctatagccgccacggaaccgcgacctacaccagccgcgacatc
ctcaccgccgagcggcgaatcctggccgcagcgcaccaacttgatggccgtgtcgcggcc
gcgacagacgtgcgtttagccctcgcggacgccgccgcgcacggcaaaaacctcaacgac
ggccaagccgctctggtagcccaaatggccctcggtggccgccgcgtagggctcgcgttg
gccccggccggggcgggcaagactaccgccatggccgccctggcgcacgcctggcgcagc
tccggcggacaggtcctcgggctggcccccaccgcggccgcggcgatcgtgctcggcgaa
gacctgggcgcaaccaccgacactctcgagaagtacgtgcactgcaccgatgagaacaac
gccgcgatttacggcactccggactggttcacccaggttggccccgacaccctgatcgtg
gtcgacgaggccgggatggcgtccacccccggtctggacgccctgatcacccacgccctc
agcgcaggcgcgagtgtgcggctggtcggtgatgacgcccagctcgcctccatctccgcc
ggcggggtgctgcgcgacatcgccaccgacaccggagccctcacgctgtcggaggtggtg
cggtttcactcccgcgccgaagccgccgcctcgctggcgctgcgcggtggggatccggcc
gggatcggcttttacctcgacgccggccgcatccacatcggcaccgaacagacctccgct
gacgccgccttcaccgcgtggcaggccgaccaggacgccggccgcgacagcctgctgctg
gcgcccaccaacgcgatcgtcaacgaactcaacgtccgcgcccgcaccgcacggctggcc
gcggcgctcgaggcagacccgcaggcgacgccgggccgcgaaaccacgctctccgatggc
ctgaccgccagcgtcggcgatgtcatccgcacccgccgcaacaaccgccagctgcccctg
tcgggcaccgattacgtccgcaacggctacaccttcaccatcgtcgacatcgccacagac
ggggcactgacggcgcgccaccgcggcaccggccgcgagatcaccctgccgacggactac
gtcaccgaccacgtgacgctgggctacgcgaccaccatcgacgccgcccaaggctccacc
gccggccacgcctgccacgtcgtcggtgccgaacacctgacccgccagcacctctacgtc
gccctcacccgcggccgcgccgaaaaccacctctacctgtccaccgccgaaaccgacccg
caccgcatcctcgccccgaaagccacccaccccgacaccgccgtcgatgtcctgtcccgg
atcgtggcccgcgacggtgcccaggtctcggccaccaccgccgcccgacaagccgccgac
cccagtcgccgcctggccgcggccgccaacatgttcaccgacgccctcgccaccgccgcc
gaaaaccaactcggtgaaggggcacgtgcacgcttggacgccctcgccgaatccgtgcac
cccgatctcacgacctgcaccgcatggccggtcctgcgccgcagcctggccatgcgcgca
ctatccggcgccgatccgggtcggctgctcaccgccgcgtacgcccgcggcggcctcgac
gacgccgctgacgcggccgccgtcctggactaccgcatcgacctcaccgatggcgacggc
cgcggcagcgggccgctgcgctggctgcccgctatccccaccgtcctggcagacaacccg
cactggggtgactacctgcaccggcgcgaacacctcgtcaccgacctggccgaccaaatc
cgcgaccacgcccgctcctggaccaccgagatcgccccgccctgggcgcggcccttgatc
gccgctaacgccaatcccaccctgaccgccgagatcgccgtgttccgggccgccaccgcc
gtcacggccgccgacacccgcctcaccggctccccgcaatacccggtggccacccgcgcc
gtgcaagacctgctgcagcgccacggcatcgacgccatcgcacacagccggcccgacacc
acacagtggcatgacctgatcgacgcgatcgacccccgtgtccgcgctgacgaatactgg
cccaccctggccgcgcagcttgcagaagccgcccccaccaacaacattcctcaactactc
gccgacgccgcacaccaaggaccgctccccgacgagatgcccgccgccgccctctggtgg
cgcatcaccgagacgctggcccccaccgccgccgtacccgaaccacaggagtccgtcgag
cacgcttctgatgctgcgctcgtcgaggtcctggccgccgcccaccgcaacggcgacccg
ctgcgcctcccggcaccgcagcccgatcctgtcgcccccgcactgaccgctccgtatgtc
gtgaccaccctcgccgccgaccacgacacccccgaactggccgaagcgatcgcggcggcc
gccgccgatgccggccgcagctacctacgcgtgcccgccacaccacagtccgaccgctac
agcctggccgagctcgccgacaagatcaccgaccgccggccaccgcgcgcggcgctggtg
gtcgtcgaggacgctgccgccgccgaccccgcccagctcgccacggtggccaccgccttg
gccgacgcccacggccgactcctgctcatcgacaacggtgagcccggacccggccgccgc
ctcctcgacgggatgggacttccgtggagcgaaaacagccgtcccacaatcacaatcgaa
gacacggccctagccgattccgccgacaaccaccgcgccgccgccgcgaaacgctggcgc
accctcaccaatcggcatgggcgcgaccgaggccgcgacagagaccagcaatacggattg
gacattgactga
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