Mycobacterium sp. MCS: Mmcs_2210
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Entry
Mmcs_2210 CDS
T00367
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mmc
Mycobacterium sp. MCS
Brite
KEGG Orthology (KO) [BR:
mmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmc03016
]
Mmcs_2210
Enzymes [BR:
mmc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Mmcs_2210
Transfer RNA biogenesis [BR:
mmc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Mmcs_2210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ABG08318
UniProt:
A0A5Q5BJ63
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All DBs
Position
complement(2349092..2350378)
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AA seq
428 aa
AA seq
DB search
MSETPDTDPEGPDTDIDAEAGTDTGAVPLLTPADGVPDLAVTTDEILAAAELLAGGHGPF
AIDAERASGFRYSNRAYLVQIRREGAGTVLIDPVNHGEDPTMVMAPVADVLDTDEWVLHA
ADQDLPCLAELGMRPPKLYDTELAGRLAGLARVNLATMVSELLGLQLMKGHGAADWSKRP
LPDDWLNYAALDVEVLLELRDAVAAVLDDQGKTDWAIQEFEHLRTYEAAPTRRDRWRRTS
GIHKVRNPRALAAVRELWTTRDHIARRRDIAPGRILPDAAIINAATADPDSVEKLTALPV
FGGTRQRRSAQVWLDALDRARHNTDPPDSAEPPNGPPPPSRWARRKPEAAARLEAARAGL
SALSERVAVPSENLVTPEVVRRLCWDWQPVTDIAAAVEEFLVAAGVRPWQRDLVVPVLTA
ALAPSTAE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacacccgacacggaccccgagggcccagacaccgacatcgacgccgaggcc
ggcaccgacacgggggctgtcccgctgctcacccccgccgacggggtgcccgacctcgcg
gtgaccaccgacgagatcctcgccgccgccgaactgctcgccgggggccacggtccgttc
gcgatcgacgccgaacgcgcctcggggttccggtactccaaccgggcctacctggtgcag
atccggcgcgaaggcgcgggcaccgtgctgatcgacccggtcaaccacggcgaggacccg
acgatggtgatggctccggtggccgatgtcctcgacaccgacgaatgggtgctgcacgcc
gccgatcaggatctgccgtgcctggccgagctgggcatgcggccgccgaagctatacgac
accgaactcgccggccggctggccggccttgcgcgggtgaacctcgcgacgatggtctcc
gaactgctcggactgcagctgatgaagggccacggcgccgccgactggtccaagcgaccg
ctgcccgacgattggctcaactacgccgcgctcgacgtcgaagtgctgctcgaactgcgc
gacgccgtcgccgcggtgctggacgatcagggcaagaccgattgggccatacaggaattc
gaacacctgcgcacctacgaggcggcccccacccgccgcgaccggtggcggcgcacctcc
ggaatccacaaggtgcgcaacccccgggcgctggcggccgtgcgcgaactgtggaccacg
cgcgaccacatcgcccgcaggcgcgacatcgcgccgggccgcatcctgcccgacgccgcg
atcatcaacgccgccaccgccgatcccgacagcgtcgagaagctcaccgcactgccggtg
ttcggcggcacccggcagcgccgcagcgcccaggtgtggctcgacgcgctcgaccgggcg
cgccacaacaccgatccgcccgactcggccgaaccgcccaacggtccgccgccgccgtcg
cggtgggcgcggcgcaaacccgaggcggccgcacgcctggaagccgcccgcgccggcctg
tccgcgctgtcggagcgggtggcggtgccctcggagaacctcgtcaccccggaggtggtg
cgtcggctgtgctgggactggcagccggtcaccgacatcgccgccgcggtcgaggagttc
ctggtggccgcaggcgtgcgcccgtggcaacgcgatctggtggtgccggtgctgaccgcc
gcgctcgccccctcgaccgccgaatga
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