Mycobacterium sp. MCS: Mmcs_2506
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Entry
Mmcs_2506 CDS
T00367
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mmc
Mycobacterium sp. MCS
Pathway
mmc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmcs_2506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmc03019
]
Mmcs_2506
03400 DNA repair and recombination proteins [BR:
mmc03400
]
Mmcs_2506
Enzymes [BR:
mmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mmcs_2506
Messenger RNA biogenesis [BR:
mmc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmcs_2506
DNA repair and recombination proteins [BR:
mmc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mmcs_2506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
Cas3-like_C_2
HEM4
PcrA_UvrD_tudor
DUF3553
E2F_TDP
Motif
Other DBs
NCBI-ProteinID:
ABG08614
UniProt:
A0A5Q5BJQ2
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Position
2662747..2664378
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AA seq
543 aa
AA seq
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MVAVGERAAELCRMARRVFGWDELHPEQLEAMMAVLAGRDVVAVLPTGSGKSAIYQVPAV
LLDGATVVVSPLIALQEDQIAGLADTRAPEAVAINSRQRASQTDDNWAAVHSHEAEYIFV
SPEQLANDAVVGRLAEAAVSLIVVDEAHCVSAWGHDFRPDYLRLADAFAQFGNGAPVVAL
TATASVVVRREIVERLGLRDPLMVVGNFDRPNLTLEVEQFVRDADKRAAVVDTVAGLEVP
GLVYTATRKDAARYADALGERGVRAAVYHAGLVAAERERVHESFREDAVDVVVATSAFGM
GIDKPNVRFVVHASVPDSLDSYYQQIGRAGRDGGDARVLLFYRAEDLGLARFFTTHRPDA
DLIEAVYRALDTDKPMRTKALRERLDAQGRRLTNAINLLESADAIRSTRKGFYSNGIPPR
VAVEAAIEVVEARERVDRSRVEMMRGYAESRHCRRQFLLTYFGQPLPGPCGNCDRCRDGE
GATDADAGGQPAIPVDTAVSHREWGDGVVIGGDTDRVTVLFDDYGYRTLAMAAVTGKNLL
TTR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtggttgcagtaggtgagcgggcggcggaactgtgccgcatggcccggcgggtgttcggc
tgggacgaactgcaccccgaacaactcgaggcgatgatggccgtcctcgccggccgcgac
gtggtggcggtgctgccgaccggttcgggtaagtccgcgatctatcaggttcccgcggtg
ctgctcgacggcgccaccgtggtcgtctcgccgttgatcgccctgcaggaggatcagatc
gccggcctggccgacacccgtgcccccgaggccgtcgcgatcaactcccggcagcgcgcg
tcccagaccgatgacaactgggccgcggtgcacagccacgaggctgagtacatcttcgtc
tcgccggagcagttggccaacgatgccgtcgtcggcaggctcgccgaggcggcggtgtcg
ctgatcgtcgtcgacgaagcgcactgcgtgtcggcgtgggggcatgacttccggccggat
tatctgcggttggccgacgcgttcgcccagttcggcaacggggcgccggtggtggcgctc
accgcgacggcgtcggtggtggtgcgccgcgagatcgtggaacggttggggctgcgggac
ccgctgatggtcgtcggcaacttcgaccggcccaacctgacgctcgaggtggagcagttc
gtgcgtgacgccgacaagcgcgccgcggtggtggacaccgtcgccgggctcgaggtaccg
gggctggtctacaccgccacccgcaaggacgccgcgcgctacgccgatgcgctgggtgag
cggggcgtccgcgcggcggtgtaccacgccggactggtcgccgccgaacgcgaacgcgtc
cacgagagtttccgtgaggacgccgtcgacgtggtggtggccacctcggcgttcgggatg
gggatcgacaaacccaacgtgcggttcgtcgtccacgcatcggtgcccgattcgctggac
tcgtactaccagcagatcggcagggccggacgcgacggcggcgacgcgcgcgtgctgctg
ttctaccgggccgaggatctggggctggcccgattcttcaccacccaccgtcccgacgcc
gacctcatcgaggccgtctaccgggcgctcgacaccgacaaacccatgcggaccaaggcg
ctgcgcgaacgcctcgacgcgcagggacgccggctgaccaacgcgatcaacctcctggaa
tcggccgacgcaatccgatcgacacgaaaagggttctactccaacgggatcccgcctcgc
gttgcggtggaggccgcgatcgaggtggtcgaggcgagggaacgcgtggaccgcagccgc
gtcgagatgatgcgcggctacgccgaatcgcggcactgccgtcggcagttcctgctcacc
tacttcggccagccgctgcccggaccgtgcggcaactgcgaccgctgccgcgacggtgag
ggtgccaccgacgcggacgccggcggacagcccgccatcccggtggacaccgccgtttcc
caccgggagtggggggacggcgtggtgatcgggggcgacaccgaccgtgtcaccgtgctg
ttcgacgactacggataccgcacgctggccatggcggccgtcaccgggaagaacctgctc
acgacgcggtga
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