Entry |
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Name |
(GenBank) DNA polymerase I
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KO |
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Organism |
mmc Mycobacterium sp. MCS
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mmc00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mmcs_3011
03410 Base excision repair
Mmcs_3011
03420 Nucleotide excision repair
Mmcs_3011
03440 Homologous recombination
Mmcs_3011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:mmc03032]
Mmcs_3011
03400 DNA repair and recombination proteins [BR:mmc03400]
Mmcs_3011
Enzymes [BR:mmc01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mmcs_3011
DNA replication proteins [BR:mmc03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mmcs_3011
DNA repair and recombination proteins [BR:mmc03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mmcs_3011
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mmcs_3011
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(3181186..3183948)
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AA seq |
920 aa
MSAGVHRVEPVSPASTSTDKKTATSQKADDKPTLMLLDGNSLAYRAFYALPAENFKTQGG
LTTNAVYGFTAMLINLLRDEQPSHVAAAFDVSRQTFRVDKYPEYKAGRSSTPDEFRGQID
IAKEVLVALGIAVLAEPGFEADDIIATLATQAEGEGYRVLVVTGDRDALQLVSDDVTVLY
PRKGVSDLTRFTPDAVQEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYG
SLQALVDNVDQVKGKVGDALRANLSHVVLNRELTDLVKDVPLPHTPDTLRVQPWDRDQLH
RLFDDLEFRVLRDRLFETLAAVEPEVEHGFDVRGKALERGELAAWLSEHSLGNRFGLAVV
GTHLAYDADATALAIVAADGDGRYIDTTSLDPDDEAALASWLADPGPPKALHEAKLAMHD
LAGRGWKLAGVTSDTALAAYLVRPGQRSFSLDDLSLRYLRRELRADNPAQQQLSLLDDSD
GGDDQAVQTLILRAVAVLDLADALDEELARIDSSSLLGRMELPVQRVLAEMEHTGIAVDI
DQLRQLQSEFADLIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTD
ADALQSLFDKTGHPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLS
STEPNLQNIPIRTEAGRRIRDAFVVGDGYTEVMTADYSQIEMRIMAHLSQDAGLIEAFNT
GEDLHSFVASRAFDVPIDEVTPDLRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKVQMD
QYFARFGGIRDYLRDVVDQARKDGYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQ
GSAADIIKVAMIDVDQAIKDAGLSSRMLLQVHDELLFEVADGERDTLEKLVRDKMGSAYA
LDVPLEVSVGYGRSWDAAAH |
NT seq |
2763 nt +upstreamnt +downstreamnt
gtgtcggcgggggtgcatagagttgagcccgtgagcccagccagcacctcgaccgacaag
aagacggccaccagccagaaggcggacgacaagccgacactgatgctgctggacggcaac
tcgctggcgtaccgcgccttctacgcactccccgccgagaacttcaagacccagggcggc
ctgaccaccaacgcggtctacggattcaccgcgatgctgatcaacctgctccgcgacgag
cagccctcccatgtggccgccgcgttcgacgtctcccggcagacgttccgcgtcgacaag
tacccggagtacaaggccggccgctcgtcgactccggacgagttccgcgggcagatcgac
atcgccaaggaggtgctcgtcgcgcttggcatcgccgtgctggccgaacccggcttcgag
gccgacgacatcatcgccacgctcgccacccaggccgagggtgagggttaccgggtgctc
gtcgtgaccggtgaccgcgacgcgctccagctcgtcagcgacgacgtgacggtgctctat
ccccgtaagggcgtcagcgacctgacccgcttcacgcccgacgcggtgcaggagaagtac
gggctgacgccgcagcagtacccggacttcgccgcgctgcggggcgatccgagcgacaac
ctgcccggcatcccgggcgtgggggagaagacggcgaccaagtggatcgccgagtacggg
tcgctgcaggccctggtggacaacgtcgaccaggtcaagggcaaggtcggcgatgctctg
cgggccaacctgtcccacgtggtgctcaaccgcgaactcaccgacctcgtcaaggacgtc
ccgcttccgcacactcccgacaccctgcgggtgcagccgtgggaccgcgatcagctccac
cggctgttcgacgacctcgagttccgggtgctgcgcgaccgcctgttcgagactctggcg
gccgtcgaacccgaggtcgaacacggcttcgacgtgcggggcaaggcgctcgaacggggt
gaactcgcggcctggctgtccgaacacagcctcggcaaccggttcgggctcgcggtcgtc
ggcacccatctcgcctacgacgccgacgccaccgcgctggccatcgtcgccgccgacggc
gacggtcgctacatcgacacgacctcgctcgacccggacgacgaggcggcgctggcgtcg
tggctggccgacccgggcccgccgaaggcgctgcacgaagccaagctcgccatgcacgac
ctcgccggtcgcggctggaagctcgccggggtcacctccgacacggcgctggccgcctac
ctggtgcggcccgggcagcgcagcttcagcctcgacgatctgtcgctgcgctacctgcgt
cgggaactgcgcgcggacaaccctgcgcaacaacaactctcactgctcgacgacagtgac
ggcggcgacgaccaagccgtccagacgctgatcctgcgggccgtggcggtgctcgacctc
gccgacgcgctcgacgaggaactcgcccgcatcgactcgtcgtcgctactgggccggatg
gagttgccggtgcagcgggtgctcgccgagatggagcacaccggtatcgccgtcgacatc
gatcaactgcggcagttgcagagcgagttcgccgacctgatccgcgatgccgccgaggcg
gcctacgcggtgatcggcaagcagatcaacctcggctcgcccaaacagctgcaggcggtg
ctgttcgacgaactcgagatgcccaagactaagcggaccaagaccggatacaccacggat
gccgatgcactgcagtcgttgttcgacaagaccggtcatcctttcctgcagcatctgctg
gcccatcgcgacgccacccggctcaaggtgaccgtcgacggcctcttgaactccgtcgcc
tccgacggccgtatccacacgacgttcaaccagacgatcgccgcgaccggtcggctgtcg
tcgaccgaaccgaatctgcagaacatcccgatccgcaccgaggcgggccggcgtatccgc
gacgccttcgtggtcggagacggatacaccgaagtcatgaccgccgactacagccagatc
gagatgcgcatcatggcgcacctgtcacaggacgccggtctgatcgaggcgttcaacacc
ggagaggacctgcactcgttcgtcgcctcgcgcgcgttcgacgtgccgatcgacgaggtg
accccggacctgcgccgccgggtcaaggcgatgtcgtacgggttggcctacgggctgagc
gcgtacggattggccgcgcagctcaagatctccaccgaagaggccaaggtccagatggac
cagtacttcgcccgtttcggcggtatccgcgattacctgcgcgacgtcgtcgaccaggcc
cgcaaggacggctacacctcgacggtgttcggtcgcaggcggtatctgcccgaactcgac
agcagcaaccgcaacgtccgcgaggccgcggagcgggccgcgctcaacgccccgatccag
ggcagcgccgcggacatcatcaaggtcgcgatgatcgacgtcgatcaggcgatcaaggac
gccggcctctcgtcacggatgctgctgcaggtgcacgacgagttgctgttcgaggtcgcc
gacggcgagcgcgacacgctcgagaagctggtccgcgacaagatgggcagcgcgtacgcc
ctcgacgttccgctcgaggtcagtgtcgggtacggccggagctgggacgcggcggcgcac
tga |