Mycobacterium sp. MCS: Mmcs_3289
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Entry
Mmcs_3289 CDS
T00367
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mmc
Mycobacterium sp. MCS
Pathway
mmc03030
DNA replication
mmc03430
Mismatch repair
mmc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mmcs_3289
03430 Mismatch repair
Mmcs_3289
03440 Homologous recombination
Mmcs_3289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmc03032
]
Mmcs_3289
03400 DNA repair and recombination proteins [BR:
mmc03400
]
Mmcs_3289
Enzymes [BR:
mmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mmcs_3289
DNA replication proteins [BR:
mmc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Mmcs_3289
DNA repair and recombination proteins [BR:
mmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Mmcs_3289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
ABG09396
UniProt:
A0A5Q5BM05
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All DBs
Position
3485458..3487350
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AA seq
630 aa
AA seq
DB search
MGQGSVGAVGGAAEQLSFDMEALSLRDTTFVVVDLETTGGRATGERPDAITEIGAVKVRG
GEVLGELATLVDPGRAIPPQIVSLTGITTAMVCAAPRIESVLPAFLEFARGSVLVAHNAG
FDIGFLRAAAEQCALTWPRPPVLCTVKLARRVLTRDEAPSVRLSALAQLFRAKTTPTHRA
LDDARATVDVLHGLIERIGNQGVHTYTDLRAYLPDVTPAQRRNRRLADGLPHRPGVYLFR
GPGDEVLYIGTAVDLRRRVGQYFTGADPRARMKEMASLATRVDHVECAHELEAGVRELRL
LAAHAPPYNRRSKFPQRWWWVVLTDEPFPRFSVVRAPRHGSAVGPFRARTDAVQTAELLA
RFTGVRTCTARLARAARHGAACAERELSPCPAPRDIDAAAYAPAHRRAADLIEGRDDAAL
AAVVDGIAALAAVNRYESAARLRDHAATGIDVLWRGQRLRALADQTELVAARPDGSGGWD
LAVVRYGRLAAAGCARRGVPPMPVVDALTAAAQTVLPDPAPLGGALVEETGLITRWLTSP
GVRIVRCEPGYATPIGAAGRWLGWADTARSARLAAEQTGADARTRESVPSELLGEPHPTR
EQLFGRPGVDGLGRPGQARLPGRHPFGVAG
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagggcagcgtcggtgccgtcgggggcgcggccgagcagctgtcgttcgacatg
gaggcgctgtcgctgcgcgacaccacgttcgtcgtcgtggacctggagaccaccggcggt
cgcgccacgggtgagcgtccggatgcgatcaccgagatcggcgcggtcaaggtccgcggc
ggtgaggtgctcggtgagctcgccaccctggtcgaccccgggcgggcgataccgccgcag
atcgtctcgctgaccggcatcaccaccgcgatggtgtgcgccgccccccgcatcgaatcg
gtgctgcccgcattcctcgagttcgcgcgcggctcggtgctggtggcccacaacgccggc
ttcgacatcggcttcctgcgggcggcggccgaacagtgcgcgctgacctggccccgcccg
ccggtgctgtgcacggtcaagctcgcgcgccgcgtgctcacccgcgacgaggcgcccagc
gtgcggctgtcagcgctggcgcagttgttccgcgcgaagacgacgccgacgcaccgggcc
ctcgacgatgcccgcgccacggtggacgtactgcacgggctgatcgaacggatcggcaac
cagggcgtgcacacctacaccgacctgcgcgcctacctgcccgacgtcacccccgcgcag
cgccgcaaccgccgcctcgccgacggtctgccccaccggccgggggtgtacctgttccgc
ggcccgggcgacgaggtgctctacatcggcaccgcggtggacctgcgccgccgcgtcggc
cagtacttcaccggagccgacccgcgggcgcggatgaaggagatggcgtccctggccacc
cgcgtggaccacgtggaatgcgcccacgaactcgaggcgggcgtgcgtgagctgcgcctg
ctggccgcccatgcgccgccctacaaccggcgttcgaagttcccgcagcgctggtggtgg
gtggtgctgaccgacgagcccttcccgcggttctcggtcgtgcgcgcaccccgtcacggt
tcggcggtcgggccgttccgggcccgcacggacgccgtgcagaccgctgaactgctcgcc
cggttcaccggtgtgcggacctgcaccgcccggctcgcccgcgcggcccggcacggcgcg
gcctgcgccgagcgtgaactgtcaccgtgcccggcgccgcgcgacatcgacgcggcggcc
tacgccccggcccaccgccgcgccgccgacctcatcgagggccgcgacgatgcggcgctg
gccgcggtggtcgacgggatcgccgcgctggcggccgtcaaccggtacgaatcggccgcg
cgcctgcgtgaccacgccgccacgggcatcgacgtgctgtggcgggggcagcgactgcgt
gcgctcgccgaccagaccgagttggtcgcggcccgtccggacggcagcggtggatgggac
ctcgccgtcgtgcggtacggacgcctggccgccgccgggtgcgcccgtcgcggggtgccg
ccgatgccggtcgtcgacgcgctgaccgccgcggcgcagacggtgctgcccgatcccgcc
ccgcttggcggtgcgctggtcgaggagaccgggctgatcacccgctggctcaccagcccc
ggtgtgcggatcgtgcggtgcgaacccgggtacgccacaccgatcggcgcggcgggccgc
tggctgggctgggcggatacggcgcgttcggcacggttggccgccgagcagaccggtgcg
gacgcgaggaccagagagtcggtcccctcagagcttctgggtgaaccgcacccaacgcgc
gagcagcttttcggccgccccggagtcgatggtctcggtcgcccgggccaggcccgcctc
ccaggccggcacccatttggcgtcgctggatag
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