Methanococcus maripaludis X1: GYY_00185
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Entry
GYY_00185 CDS
T01584
Name
(GenBank) transcription initiation factor E subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
mmd
Methanococcus maripaludis X1
Pathway
mmd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GYY_00185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmd03021
]
GYY_00185
Transcription machinery [BR:
mmd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
GYY_00185
Prokaryotic type
Archaeal type
TFE
GYY_00185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
HypA
Zn_Ribbon_TF
HTH_20
HTH_9
Zn_ribbon_ACC
DnaD_N
TrmB
HTH_Cmi2_C
HTH_34
Ribosomal_aS21
DUF5033
Zn_ribbon_RPB9
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
AEK18929
UniProt:
G0H0W4
LinkDB
All DBs
Position
48572..49129
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AA seq
185 aa
AA seq
DB search
MNLSKDEIFTMLENPLIQQVLFEIMDEDVVGFDVLSVLINTNEVTDDEISRQLDVKLNNI
RRTLYKLYEARLVDYNREKDEETNWYTYTWKPSLEKVPALVAKKMKNVLNGLKEQLNVEE
NNMFFFCSDCEIKFTFEDAMDSGFRCPQCGEMMYEYDNKKDISLLKEQIKYLEDEFNKNP
LFSTY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatcaaaagatgagatatttacaatgctcgagaaccccctgattcaacaagta
ctttttgaaataatggatgaggacgttgttggttttgatgttttgtcagtacttatcaat
actaatgaagtaacagatgacgagatttcaagacagttggatgtaaaattaaacaatatt
agaaggacactctacaaattatacgaagcaaggcttgtagattataatcgagaaaaggac
gaagaaacaaactggtacacttacacctggaaaccatctcttgaaaaagtgccagcactg
gttgctaaaaaaatgaaaaatgtactaaatggtttaaaagaacagctaaatgtggaagaa
aataacatgttttttttctgttctgactgtgaaattaaatttacatttgaagatgcgatg
gatagtggatttagatgcccccaatgtggcgagatgatgtatgaatacgataataaaaag
gacatttcactattaaaagaacagattaaatatttagaggacgaatttaataaaaaccct
cttttttctacttattaa
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