Methanococcus maripaludis X1: GYY_00210
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Entry
GYY_00210 CDS
T01584
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mmd
Methanococcus maripaludis X1
Pathway
mmd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GYY_00210 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmd03021
]
GYY_00210 (tfb)
Transcription machinery [BR:
mmd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
GYY_00210 (tfb)
Prokaryotic type
Archaeal type
TFB
GYY_00210 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Lar_restr_allev
HTH_AsnC-type
RPA_interact_C
ORC6_2nd
UPF0253
BRF2-like_C_cyclin_rpt
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
AEK18934
UniProt:
G0H0W9
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All DBs
Position
complement(53384..54403)
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AA seq
339 aa
AA seq
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MKVESVTKEDTKKPERKIKIAIAKPEDYSNKNVILEKEEELICPVCGSKSIIKDYERAEI
VCEMCGCVLQQNLFDVGPEWRAFDHEQRVKRSRVGAPMTYTIHDKGLSTVIDWRNKDSYG
KDISADKRAQLYRLRKWQRRIRVSDASERNLAFALSELDRIASKLGLPRNVRENVAVLYR
GAVEKGLIRGRSIEGVAAAALYAACRRCKVPRTLDEIAEVSRVDRKEIGRTYRFISRELN
IRLAPTNPVDYVPRFASELKLPGEVESKAISILQKAGERGLTSGRGPTGVAAAAIYIASV
LQGTRRTQREVADVAGVTEVTIRNRYKELTEHLDIDVTL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgaatctgttacaaaagaagatactaaaaagcctgaaagaaagattaaaatt
gctatcgcaaagcctgaagactactcaaataagaatgttattttagaaaaggaagaagaa
ttaatctgtcctgtctgcggtagtaaaagtattattaaggattatgaaagggctgaaatc
gtttgtgaaatgtgtggatgtgttttacagcagaatttatttgacgtgggtcctgaatgg
agagcctttgatcacgaacagcgtgtaaaaagaagtagggttggagccccaatgacttat
acaatccacgataaaggtttatcaacagttatcgactggagaaataaagacagctacgga
aaagatatttctgcagataaaagagctcaactttatagattaagaaaatggcagagaaga
atcagggtttctgatgcatctgaaagaaatttagcttttgcactttccgaacttgatagg
atcgcttcaaaattaggtcttccaagaaacgtcagggaaaacgttgcagttctctacagg
ggtgctgtagaaaaaggattaattagaggaagaagtattgaaggtgttgccgctgctgca
ctctacgctgcatgcagacgatgtaaagttccgagaactcttgatgaaattgcagaagtt
tcaagagtcgatagaaaagaaattggaagaacatatagatttatttcaagagaattaaac
atcaggcttgctccaacaaatcctgtggattacgttcctagatttgcttcagaattaaaa
ctccctggagaagtagagtcaaaagcaatatcaatcttgcaaaaagcaggagaacgcggt
cttacgagtggtaggggacctactggagttgctgctgctgcaatatatattgcaagtgtt
ttacagggaactagacgaactcagagagaagttgcagatgttgcaggagttactgaagtt
acaataagaaataggtacaaagagctaacagaacacttagatatcgatgtaacattataa
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