Methanococcus maripaludis X1: GYY_00900
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Entry
GYY_00900 CDS
T01584
Name
(GenBank) cell division protein CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mmd
Methanococcus maripaludis X1
Pathway
mmd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GYY_00900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmd03019
]
GYY_00900
03009 Ribosome biogenesis [BR:
mmd03009
]
GYY_00900
04131 Membrane trafficking [BR:
mmd04131
]
GYY_00900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmd04147
]
GYY_00900
Messenger RNA biogenesis [BR:
mmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GYY_00900
Ribosome biogenesis [BR:
mmd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GYY_00900
Membrane trafficking [BR:
mmd04131
]
SNARE
SNARE associated proteins
Others
GYY_00900
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GYY_00900
Exosome [BR:
mmd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GYY_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_2
AAA_14
AAA_22
AAA_5
AAA_33
nSTAND3
AAA_28
AAA_18
IstB_IS21
Mg_chelatase
AAA_7
RNA_helicase
ATPase
DUF815
ABC_tran
Sigma54_activat
Zeta_toxin
AAA_17
AAA_3
NPHP3_N
AAA_24
TsaE
PhoH
AAA_lid_PRS2_C
Sigma54_activ_2
ATP-synt_ab
SLFN-g3_helicase
AAA_30
Vps4_C
Parvo_NS1
RTP1_C1
Motif
Other DBs
NCBI-ProteinID:
AEK19068
UniProt:
G0H1R1
LinkDB
All DBs
Position
complement(178534..180900)
Genome browser
AA seq
788 aa
AA seq
DB search
MVDLMVAEAYQGDVGKGIVRIDPLTMEKLSLKAGDAIEIAGKEKTYATVWRGYLEDQGKG
IIRMDGILRQNTKAGIGDKVKITVVEVKEAKKITLAPMQAVRFSTGFESYVGSRLVEQVV
DKGSKVVIGVLGTAFPFIVTGTTPKGPVKINEYTQIELKTEPVTELKETKVPNVTYEDIG
GLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFY
TINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAVAPKRDEASGEVERRMVAQ
LLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGRNEILQIHTRN
MPLQPDYEKSDVISILNELVGEYDRSKIESLVKLVEKASSEEEIEKILKDGEVEDKVKVK
LNQSMVKELADKTHGFAGADLAALSKEAAMKTLRRFLPDIDLEKEEIPREVLDKIKVTKE
DFVGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRP
PKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAA
PTVIFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQ
ALLRPGRLDRIVLVPIPNETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVC
REAAMIALRENINSEHVESRHFDGAFKRIAPSVKDDDMDEYKDLAKEYGQNAGVSEIEKG
PENTGYRG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggtagatttaatggtcgcagaagcctaccagggagatgtaggcaagggaattgtaaga
attgatccgctaacgatggaaaaactctccttaaaagcaggagatgccatagaaattgca
ggaaaagaaaaaacttacgcaaccgtctggagaggatacctcgaagatcagggaaaaggt
atcataagaatggacggtattttaagacagaatactaaagccggtattggggataaagta
aaaattaccgtcgttgaagtaaaagaagctaaaaaaataacactcgcaccgatgcaagcc
gtaagattcagcaccgggtttgaaagttatgttggaagcagacttgtagaacaggtcgta
gataaaggttctaaagttgtaattggggttttaggaaccgcatttccattcattgtaact
ggaactactccaaaaggaccagtaaaaattaatgaatatacacaaattgaattaaaaacc
gaaccagttaccgaattaaaagaaaccaaagttccaaacgtaacttacgaagatatcggt
ggtttaaaagaggaagtcaaaaaaatcagggaaatggtagaacttccaatgagataccct
gaattatttgataaactgggtattgaaccgccaaaaggagtattacttgcaggacctcct
ggaactggaaaaacactgcttgcaaaagctgttgcaaatgaagccggagctaacttctat
acgataaacggccctgaaataatgagtaaatatgtcggtgaaaccgaagaaaatttaaga
aaaatatttgaagaagctgaagaaaatgcgccttcaattatatttattgatgaaatcgat
gcagttgctccaaaaagggatgaagcaagcggtgaagttgaaagaagaatggttgctcag
cttttaacactgatggacggtcttgaaagtagaggtcagctcgtaattctcgcagctaca
aatagaccagattcaatcgatatggccttgagaagacctggaagacttgacagggaaatt
acgattggaattcccgatagacacggtagaaacgagattttgcagatacatacaagaaat
atgccacttcaaccagattatgaaaaatctgatgtaatttcaatattaaatgaacttgtt
ggagaatatgataggagcaaaatcgaaagccttgtcaaattagtcgaaaaagcgtcatca
gaagaagaaatcgaaaaaatattaaaagacggcgaagtggaagacaaagtaaaagtaaaa
ttaaatcaatcaatggtaaaagaacttgcagacaaaacacacggttttgctggtgctgat
ttagctgctctttcaaaagaagctgcaatgaaaactttaagaagattcctgcctgacatc
gaccttgaaaaagaagaaattcctcgagaagtcctcgataaaattaaagtaactaaagaa
gactttgtgggcggtttgaaagaagtagaaccttctgcattgagagaagtacttgtagaa
gttccaaatatcaaatggagtgatgttggagggcttgaagacattaaacaggatttaaaa
gaagctgttgaatggccaattaaaaataaagaaatgtttgaaagaatgggaataaggccc
ccaaaaggagttttactctttggtcctccaggaactggaaaaacattgcttgcaaaagct
gttgcaaatgaaagtgaagcaaatttcatcagcgtcaaaggcccagaaatattcagcaaa
tgggtcggggaaagcgaaaaagcaatccgtgaaatatttagaaaagcaagacaggctgct
ccaacagttattttctttgatgaaatcgattcagtcgctccaaaaagaggaatggacttt
ggaagtagcggtgttactgaaaaagttgtaaatcagcttttaacagaacttgatggtctt
gaagaacctaaagatgtagtgataattgctgcaacaaacaggcccgacatattagatcag
gcacttttaaggcctggaagactcgatagaattgtattagttcctattcctaatgaaaca
gcaagacttgagatatttaaagttcacacgaaaggaatgcctattggaaaagatgtaaac
cttgaaaaacttgcaaaagaaactaaaggatatactggtgcagatatagaagcagtttgt
agagaagctgcaatgattgcattaagggaaaatataaattcagaacatgtcgaatcgaga
cactttgacggtgcgtttaaaagaattgcaccttctgtaaaagatgatgatatggatgaa
tacaaagacctcgcaaaagaatacggtcaaaacgcaggcgtatccgagattgaaaaaggc
cctgaaaataccggataccgcggataa
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