Methanococcus maripaludis X1: GYY_00900
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Entry
GYY_00900 CDS
T01584
Name
(GenBank) cell division protein CDC48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mmd
Methanococcus maripaludis X1
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmd03019
]
GYY_00900
03009 Ribosome biogenesis [BR:
mmd03009
]
GYY_00900
04131 Membrane trafficking [BR:
mmd04131
]
GYY_00900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmd04147
]
GYY_00900
Messenger RNA biogenesis [BR:
mmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GYY_00900
Ribosome biogenesis [BR:
mmd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GYY_00900
Membrane trafficking [BR:
mmd04131
]
SNARE
SNARE associated proteins
Others
GYY_00900
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GYY_00900
Exosome [BR:
mmd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GYY_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
TIP49
AAA_2
AAA_14
AAA_22
AAA_5
AAA_33
nSTAND3
AAA_18
AAA_28
IstB_IS21
Mg_chelatase
RNA_helicase
AAA_7
Zeta_toxin
ATPase
DUF815
Sigma54_activat
AAA_3
AAA_17
ABC_tran
PhoH
TsaE
AAA_24
ATP-synt_ab
Sigma54_activ_2
AAA_30
Vps4_C
SLFN-g3_helicase
Parvo_NS1
bpMoxR
AFG1_ATPase
RTP1_C1
Motif
Other DBs
NCBI-ProteinID:
AEK19068
UniProt:
G0H1R1
LinkDB
All DBs
Position
complement(178534..180900)
Genome browser
AA seq
788 aa
AA seq
DB search
MVDLMVAEAYQGDVGKGIVRIDPLTMEKLSLKAGDAIEIAGKEKTYATVWRGYLEDQGKG
IIRMDGILRQNTKAGIGDKVKITVVEVKEAKKITLAPMQAVRFSTGFESYVGSRLVEQVV
DKGSKVVIGVLGTAFPFIVTGTTPKGPVKINEYTQIELKTEPVTELKETKVPNVTYEDIG
GLKEEVKKIREMVELPMRYPELFDKLGIEPPKGVLLAGPPGTGKTLLAKAVANEAGANFY
TINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAVAPKRDEASGEVERRMVAQ
LLTLMDGLESRGQLVILAATNRPDSIDMALRRPGRLDREITIGIPDRHGRNEILQIHTRN
MPLQPDYEKSDVISILNELVGEYDRSKIESLVKLVEKASSEEEIEKILKDGEVEDKVKVK
LNQSMVKELADKTHGFAGADLAALSKEAAMKTLRRFLPDIDLEKEEIPREVLDKIKVTKE
DFVGGLKEVEPSALREVLVEVPNIKWSDVGGLEDIKQDLKEAVEWPIKNKEMFERMGIRP
PKGVLLFGPPGTGKTLLAKAVANESEANFISVKGPEIFSKWVGESEKAIREIFRKARQAA
PTVIFFDEIDSVAPKRGMDFGSSGVTEKVVNQLLTELDGLEEPKDVVIIAATNRPDILDQ
ALLRPGRLDRIVLVPIPNETARLEIFKVHTKGMPIGKDVNLEKLAKETKGYTGADIEAVC
REAAMIALRENINSEHVESRHFDGAFKRIAPSVKDDDMDEYKDLAKEYGQNAGVSEIEKG
PENTGYRG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggtagatttaatggtcgcagaagcctaccagggagatgtaggcaagggaattgtaaga
attgatccgctaacgatggaaaaactctccttaaaagcaggagatgccatagaaattgca
ggaaaagaaaaaacttacgcaaccgtctggagaggatacctcgaagatcagggaaaaggt
atcataagaatggacggtattttaagacagaatactaaagccggtattggggataaagta
aaaattaccgtcgttgaagtaaaagaagctaaaaaaataacactcgcaccgatgcaagcc
gtaagattcagcaccgggtttgaaagttatgttggaagcagacttgtagaacaggtcgta
gataaaggttctaaagttgtaattggggttttaggaaccgcatttccattcattgtaact
ggaactactccaaaaggaccagtaaaaattaatgaatatacacaaattgaattaaaaacc
gaaccagttaccgaattaaaagaaaccaaagttccaaacgtaacttacgaagatatcggt
ggtttaaaagaggaagtcaaaaaaatcagggaaatggtagaacttccaatgagataccct
gaattatttgataaactgggtattgaaccgccaaaaggagtattacttgcaggacctcct
ggaactggaaaaacactgcttgcaaaagctgttgcaaatgaagccggagctaacttctat
acgataaacggccctgaaataatgagtaaatatgtcggtgaaaccgaagaaaatttaaga
aaaatatttgaagaagctgaagaaaatgcgccttcaattatatttattgatgaaatcgat
gcagttgctccaaaaagggatgaagcaagcggtgaagttgaaagaagaatggttgctcag
cttttaacactgatggacggtcttgaaagtagaggtcagctcgtaattctcgcagctaca
aatagaccagattcaatcgatatggccttgagaagacctggaagacttgacagggaaatt
acgattggaattcccgatagacacggtagaaacgagattttgcagatacatacaagaaat
atgccacttcaaccagattatgaaaaatctgatgtaatttcaatattaaatgaacttgtt
ggagaatatgataggagcaaaatcgaaagccttgtcaaattagtcgaaaaagcgtcatca
gaagaagaaatcgaaaaaatattaaaagacggcgaagtggaagacaaagtaaaagtaaaa
ttaaatcaatcaatggtaaaagaacttgcagacaaaacacacggttttgctggtgctgat
ttagctgctctttcaaaagaagctgcaatgaaaactttaagaagattcctgcctgacatc
gaccttgaaaaagaagaaattcctcgagaagtcctcgataaaattaaagtaactaaagaa
gactttgtgggcggtttgaaagaagtagaaccttctgcattgagagaagtacttgtagaa
gttccaaatatcaaatggagtgatgttggagggcttgaagacattaaacaggatttaaaa
gaagctgttgaatggccaattaaaaataaagaaatgtttgaaagaatgggaataaggccc
ccaaaaggagttttactctttggtcctccaggaactggaaaaacattgcttgcaaaagct
gttgcaaatgaaagtgaagcaaatttcatcagcgtcaaaggcccagaaatattcagcaaa
tgggtcggggaaagcgaaaaagcaatccgtgaaatatttagaaaagcaagacaggctgct
ccaacagttattttctttgatgaaatcgattcagtcgctccaaaaagaggaatggacttt
ggaagtagcggtgttactgaaaaagttgtaaatcagcttttaacagaacttgatggtctt
gaagaacctaaagatgtagtgataattgctgcaacaaacaggcccgacatattagatcag
gcacttttaaggcctggaagactcgatagaattgtattagttcctattcctaatgaaaca
gcaagacttgagatatttaaagttcacacgaaaggaatgcctattggaaaagatgtaaac
cttgaaaaacttgcaaaagaaactaaaggatatactggtgcagatatagaagcagtttgt
agagaagctgcaatgattgcattaagggaaaatataaattcagaacatgtcgaatcgaga
cactttgacggtgcgtttaaaagaattgcaccttctgtaaaagatgatgatatggatgaa
tacaaagacctcgcaaaagaatacggtcaaaacgcaggcgtatccgagattgaaaaaggc
cctgaaaataccggataccgcggataa
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