Methanococcus maripaludis X1: GYY_03745
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Entry
GYY_03745 CDS
T01584
Name
(GenBank) RecJ-like protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmd
Methanococcus maripaludis X1
Pathway
mmd03410
Base excision repair
mmd03430
Mismatch repair
mmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GYY_03745
03430 Mismatch repair
GYY_03745
03440 Homologous recombination
GYY_03745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmd03400
]
GYY_03745
DNA repair and recombination proteins [BR:
mmd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GYY_03745
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GYY_03745
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GYY_03745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AEK19628
UniProt:
G0H4J7
LinkDB
All DBs
Position
complement(692089..693384)
Genome browser
AA seq
431 aa
AA seq
DB search
MDILPIEDISKFNQITGKIKEKIENCDGLIRIVTHHDPDGLTAGSIMLKTLLRLNKNVQM
TILEHLSKESVEELSKENDKMFIFCDMGSGQINLINNLQFNAVILDHHPPEVAETEIGNI
LQLNPHLFGANGAKEISASGVCYLIARLFEYYDLATVAVVGAIGDMQHLPFIGLNKYILN
EASKYRYLSVIKDIVYNCYNLPISRSIYYSTQPYIRELDSIDKIKEILEELSINPEKKGI
TVAEKENLLEYFKCFNKNDDLIVDRYEINHKLNDAFYLSEVLNACGRKEMTSVGIGILLG
DDECIRQGENLYKEYKDELIEELKNVKLTSMDNIEYFIGEKGKTGIISALMVKDKPVLGF
NEQGEIYKVSSRGSKELVECGLNLSKAMAVSKEFGGDGGGHNIASGAAIQKNYLNEFLEK
VNEIVGEQLKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatatactcccgattgaagacatttctaaatttaaccagattactggaaaaataaaa
gaaaaaatagaaaattgtgacggattaataagaatcgttacacatcacgaccccgatgga
ctgactgcgggttcaataatgttgaaaacacttctaaggctaaataaaaatgtgcaaatg
actattctggagcatttatcaaaagaatcagtcgaagaactttcaaaagaaaacgataaa
atgtttatattttgtgacatgggaagcggccagattaatttgataaataaccttcaattc
aatgcggtaattctcgaccaccaccctccggaagttgcagaaaccgagattggaaatatt
ttacagttaaatcctcatttatttggggcaaacggtgcaaaagaaatttctgcaagtggt
gtttgttatttaattgcaagattgtttgagtactacgatttagcaactgttgcagttgtt
ggagcaattggggacatgcagcacctgccatttatcggattaaataaatatattttaaat
gaagctagcaaataccgttatttgagcgttataaaagatattgtttataattgttacaat
ctaccaatttcaagatcaatatactactcaacccagccttacattcgagaattggatagt
attgataaaataaaagaaattcttgaagaattaagtataaatcctgaaaaaaaaggaata
actgtggctgaaaaagaaaatttgctcgaatatttcaaatgttttaacaaaaatgacgat
ttaattgttgataggtacgaaataaatcataaattaaacgatgcattttatctttctgaa
gtattaaatgcttgcggcagaaaagagatgacctcagtaggaattggaattttgcttgga
gatgacgaatgcatcagacagggcgagaatttatacaaagaatataaggatgaactaatc
gaagaattaaaaaacgtaaaactaacttcaatggataatattgagtattttatcggagaa
aagggaaaaactggtataatatcagctttaatggtaaaagataaaccagtgcttggattt
aatgagcagggtgaaatttataaagtttcttcgagaggcagtaaagaactagttgaatgc
gggttaaatctttcaaaagcaatggcagtttcaaaagaatttggcggagatggtggggga
cacaatatcgcatcaggtgctgcgattcagaaaaactacttgaatgaatttttggaaaaa
gttaacgaaattgtgggcgaacagttgaaaaaatga
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